RNA–Protein interactions for RNA: YKR055W

RHO4, Transcript of Non-essential small GTPase, yeast

Gene RHO4, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RHO4	YKR055W	NMD5	P46970	1048 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	MND1	P53102	219 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	YGL108C	P53139	140 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	DBP6	P53734	629 aa	Known RBP	5.69	□□□□□ -1.5
RHO4	YKR055W	VHS1	Q03785	461 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	UFO1	Q04511	668 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	SWF1	Q04629	336 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	CRF1	Q04930	467 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	CRR1	Q05790	422 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	SPH1	Q06160	661 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	FEX1	Q08913	375 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	LAP2	Q10740	671 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	YOR214C	Q12282	236 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	HAT1	Q12341	374 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	SRN2	Q99176	213 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	DFG16	Q99234	619 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	YPT6	Q99260	215 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	PMD1	P32634	1753 aa		5.69	□□□□□ -1.5
RHO4	YKR055W	GPM1	P00950	247 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	RPL22A	P05749	121 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	MOD5	P07884	428 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	FUS3	P16892	353 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	SRV2	P17555	526 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	ATG22	P25568	528 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	CHS3	P29465	1165 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	MLS1	P30952	554 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	SPT14	P32363	452 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	FRD1	P32614	470 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	SER1	P33330	395 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	WHI3	P34761	661 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	PRS2	P38620	318 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	GOS1	P38736	223 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	OSH7	P38755	437 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	NEM1	P38757	446 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	TRM5	P38793	499 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	YHR202W	P38887	602 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	SSP120	P39931	234 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	PCL7	P40186	285 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	YMR134W	P40207	237 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	CSM2	P40465	213 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	PKP1	P40530	394 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	ERG10	P41338	398 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	PSA1	P41940	361 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	FET5	P43561	622 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	RPE1	P46969	238 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	MSE1	P48525	536 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	COG1	P53079	417 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	DID2	P69771	204 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	SDH1	Q00711	640 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	YDR476C	Q03362	224 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	SPC19	Q03954	165 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	RTT103	Q05543	409 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	BUR2	Q05949	395 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	ISR1	Q06098	443 aa	Known RBP	5.68	□□□□□ -1.5
RHO4	YKR055W	NTO1	Q12311	748 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	DGK1	Q12382	290 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	TRM11	Q12463	433 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	YOR111W	Q99210	232 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	VCX1	Q99385	411 aa		5.68	□□□□□ -1.5
RHO4	YKR055W	LEU4	P06208	619 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	PCK1	P10963	549 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	APA1	P16550	321 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	RGP1	P16664	663 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	SEC62	P21825	274 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	AMD2	P22580	549 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	CNB1	P25296	175 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	NPP1	P25353	742 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	PEX3	P28795	441 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	MCM4	P30665	933 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	RAD24	P32641	659 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	MGM101	P32787	269 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	IMP3	P32899	183 aa	Predicted RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	SUI1	P32911	108 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	SPT10	P35208	640 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	JEN1	P36035	616 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	PPS1	P38148	807 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	RFC3	P38629	340 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	ERP5	P38819	212 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	PIG2	P40187	538 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	TOK1	P40310	691 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	SLM1	P40485	686 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RHO4	YKR055W	DIM1	P41819	318 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	RPC17	P47076	161 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	RPS7B	P48164	190 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	SLI1	P53304	468 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	SED5	Q01590	340 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	YDR541C	Q03049	344 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	AGE1	Q04412	482 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	UTP14	Q04500	899 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	YLR225C	Q05948	407 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	KAP95	Q06142	861 aa	Known RBP	5.67	□□□□□ -1.5
RHO4	YKR055W	GSH2	Q08220	491 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	GTT2	Q12390	233 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	YBR298C-A	Q8TGK4	73 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	APM4	Q99186	491 aa		5.67	□□□□□ -1.5
RHO4	YKR055W	WHI2	P12611	486 aa		5.66	□□□□□ -1.5
RHO4	YKR055W	CAF20	P12962	161 aa	Known RBP	5.66	□□□□□ -1.5
RHO4	YKR055W	GFA1	P14742	717 aa	Known RBP	5.66	□□□□□ -1.5
RHO4	YKR055W	CDC23	P16522	626 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms