RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C PFK26P40433 827 aaKnown RBP2.45□□□□□ -2.02
SHE2YKL130C YPT11P48559 417 aa2.45□□□□□ -2.02
SHE2YKL130C DUO1P53168 247 aaKnown RBP2.45□□□□□ -2.02
SHE2YKL130C MDG1P53885 366 aa2.45□□□□□ -2.02
SHE2YKL130C YNL144CP53907 740 aa2.45□□□□□ -2.02
SHE2YKL130C REG1Q00816 1014 aa2.45□□□□□ -2.02
SHE2YKL130C MUB1Q03162 620 aa2.45□□□□□ -2.02
SHE2YKL130C PLM2Q04383 521 aa2.45□□□□□ -2.02
SHE2YKL130C GTB1Q04924 702 aa2.45□□□□□ -2.02
SHE2YKL130C SWT1Q12104 458 aa2.45□□□□□ -2.02
SHE2YKL130C RRI1Q12468 440 aa2.45□□□□□ -2.02
SHE2YKL130C YER175W-AQ8TGU4 54 aa2.45□□□□□ -2.02
SHE2YKL130C HSH49Q99181 213 aaPredicted RBP2.45□□□□□ -2.02
SHE2YKL130C CHO2P05374 869 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C KGD2P19262 463 aaPredicted RBP2.44□□□□□ -2.02
SHE2YKL130C AMD2P22580 549 aa2.44□□□□□ -2.02
SHE2YKL130C LRE1P25579 583 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C CDC15P27636 974 aa2.44□□□□□ -2.02
SHE2YKL130C NPL6P32832 435 aa2.44□□□□□ -2.02
SHE2YKL130C KES1P35844 434 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C UTP9P38882 575 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C BUD16P39988 312 aa2.44□□□□□ -2.02
SHE2YKL130C SLZ1P40167 298 aa2.44□□□□□ -2.02
SHE2YKL130C AAD10P47182 288 aa2.44□□□□□ -2.02
SHE2YKL130C TAM41P53230 385 aa2.44□□□□□ -2.02
SHE2YKL130C RPT6Q01939 405 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C YSA1Q01976 231 aa2.44□□□□□ -2.02
SHE2YKL130C SYF1Q04048 859 aaPredicted RBP2.44□□□□□ -2.02
SHE2YKL130C TAF11Q04226 346 aa2.44□□□□□ -2.02
SHE2YKL130C YML053CQ04978 212 aa2.44□□□□□ -2.02
SHE2YKL130C RAD34Q06665 692 aa2.44□□□□□ -2.02
SHE2YKL130C VIP1Q06685 1146 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C RCN2Q12044 265 aa2.44□□□□□ -2.02
SHE2YKL130C LYS21Q12122 440 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C NMD4Q12129 218 aa2.44□□□□□ -2.02
SHE2YKL130C SFI1Q12369 946 aa2.44□□□□□ -2.02
SHE2YKL130C NOP58Q12499 511 aaKnown RBP2.44□□□□□ -2.02
SHE2YKL130C VCX1Q99385 411 aa2.44□□□□□ -2.02
SHE2YKL130C CKA1P15790 372 aa2.43□□□□□ -2.02
SHE2YKL130C CNA1P23287 553 aa2.43□□□□□ -2.02
SHE2YKL130C SIP1P32578 815 aa2.43□□□□□ -2.02
SHE2YKL130C BLI1P35727 113 aa2.43□□□□□ -2.02
SHE2YKL130C YKL050CP35736 922 aa2.43□□□□□ -2.02
SHE2YKL130C ALY1P36117 915 aa2.43□□□□□ -2.02
SHE2YKL130C FMP46P36141 133 aaKnown RBP2.43□□□□□ -2.02
SHE2YKL130C RPF2P36160 344 aaKnown RBP2.43□□□□□ -2.02
SHE2YKL130C PSD1P39006 500 aa2.43□□□□□ -2.02
SHE2YKL130C FLC2P39719 783 aa2.43□□□□□ -2.02
SHE2YKL130C FUN12P39730 1002 aaKnown RBP2.43□□□□□ -2.02
SHE2YKL130C NPR2P39923 615 aa2.43□□□□□ -2.02
SHE2YKL130C VRG4P40107 337 aa2.43□□□□□ -2.02
SHE2YKL130C DJP1P40564 432 aa2.43□□□□□ -2.02
SHE2YKL130C ARE2P53629 642 aaKnown RBP2.43□□□□□ -2.02
SHE2YKL130C VPS75P53853 264 aa2.43□□□□□ -2.02
SHE2YKL130C TIM10P87108 93 aa2.43□□□□□ -2.02
SHE2YKL130C RAD30Q04049 632 aa2.43□□□□□ -2.02
SHE2YKL130C YMR317WQ04893 1140 aa2.43□□□□□ -2.02
SHE2YKL130C MFB1Q04922 465 aa2.43□□□□□ -2.02
SHE2YKL130C ARP9Q05123 467 aa2.43□□□□□ -2.02
SHE2YKL130C ENT4Q07872 247 aa2.43□□□□□ -2.02
SHE2YKL130C PSK2Q08217 1101 aa2.43□□□□□ -2.02
SHE2YKL130C CTI6Q08923 506 aa2.43□□□□□ -2.02
SHE2YKL130C BAG7Q12128 409 aa2.43□□□□□ -2.02
SHE2YKL130C RRG1Q12167 365 aaPredicted RBP2.43□□□□□ -2.02
SHE2YKL130C LCB4Q12246 624 aa2.43□□□□□ -2.02
SHE2YKL130C MON2P48563 1636 aaPredicted RBP2.42□□□□□ -2.02
SHE2YKL130C ARG3P05150 338 aa2.42□□□□□ -2.02
SHE2YKL130C SUI3P09064 285 aaKnown RBP2.42□□□□□ -2.02
SHE2YKL130C YML003WP0CF16 290 aa2.42□□□□□ -2.02
SHE2YKL130C RED1P14291 827 aa2.42□□□□□ -2.02
SHE2YKL130C YCK1P23291 538 aa2.42□□□□□ -2.02
SHE2YKL130C OCA4P25366 362 aa2.42□□□□□ -2.02
SHE2YKL130C PEP3P27801 918 aa2.42□□□□□ -2.02
SHE2YKL130C SRB5P32585 307 aa2.42□□□□□ -2.02
SHE2YKL130C PXA2P34230 853 aa2.42□□□□□ -2.02
SHE2YKL130C PEX5P35056 612 aa2.42□□□□□ -2.02
SHE2YKL130C GEX2P36173 615 aa2.42□□□□□ -2.02
SHE2YKL130C KTR3P38130 404 aaPredicted RBP2.42□□□□□ -2.02
SHE2YKL130C ARO9P38840 513 aaPredicted RBP2.42□□□□□ -2.02
SHE2YKL130C RTS1P38903 757 aa2.42□□□□□ -2.02
SHE2YKL130C ERV46P39727 415 aa2.42□□□□□ -2.02
SHE2YKL130C FMP10P40098 244 aa2.42□□□□□ -2.02
SHE2YKL130C IME4P41833 600 aa2.42□□□□□ -2.02
SHE2YKL130C RMD8P43620 662 aa2.42□□□□□ -2.02
SHE2YKL130C UBX6P47049 396 aa2.42□□□□□ -2.02
SHE2YKL130C PIL1P53252 339 aaKnown RBP2.42□□□□□ -2.02
SHE2YKL130C DCP2P53550 970 aaKnown RBP2.42□□□□□ -2.02
SHE2YKL130C STP3Q05937 343 aa2.42□□□□□ -2.02
SHE2YKL130C UTP21Q06078 939 aaPredicted RBP2.42□□□□□ -2.02
SHE2YKL130C TCO89Q08921 799 aa2.42□□□□□ -2.02
SHE2YKL130C Q0010Q9ZZX9 128 aa2.42□□□□□ -2.02
SHE2YKL130C YBR085C-AO43137 85 aa2.41□□□□□ -2.02
SHE2YKL130C LCB1P25045 558 aaKnown RBP2.41□□□□□ -2.02
SHE2YKL130C PPZ1P26570 692 aa2.41□□□□□ -2.02
SHE2YKL130C HES1P35843 434 aa2.41□□□□□ -2.02
SHE2YKL130C AGP2P38090 596 aa2.41□□□□□ -2.02
SHE2YKL130C MAL33P38157 468 aa2.41□□□□□ -2.02
SHE2YKL130C RKM3P38222 552 aa2.41□□□□□ -2.02
SHE2YKL130C MUM2P38236 366 aa2.41□□□□□ -2.02
SHE2YKL130C SDS24P38314 527 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms