RNA–Protein interactions for RNA: YKL096W

CWP1, Transcript of Cell wall mannoprotein that localizes to birth scars of daughter cells, yeast

Gene CWP1, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWP1	YKL096W	YPT6	Q99260	215 aa		11.36	□□□□□ -0.59
CWP1	YKL096W	SPS1	P08458	490 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	MPH2	P0CD99	609 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	APA1	P16550	321 aa	Known RBP	11.35	□□□□□ -0.59
CWP1	YKL096W	HEM3	P28789	327 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	SPS19	P32573	292 aa	Known RBP	11.35	□□□□□ -0.59
CWP1	YKL096W	MRE11	P32829	692 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	PMT1	P33775	817 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	TFC3	P34111	1160 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	DCW1	P36091	449 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
CWP1	YKL096W	YBR259W	P38338	688 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	LRP1	P38801	184 aa	Known RBP	11.35	□□□□□ -0.59
CWP1	YKL096W	TIM17	P39515	158 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	YHB1	P39676	399 aa	Known RBP	11.35	□□□□□ -0.59
CWP1	YKL096W	GCD14	P46959	383 aa	Predicted RBP	11.35	□□□□□ -0.59
CWP1	YKL096W	TEL2	P53038	688 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	FRE4	P53746	719 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	YNR061C	P53747	219 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	PEX13	P80667	386 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	BLS1	Q06071	122 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	IRC10	Q08118	586 aa		11.35	□□□□□ -0.59
CWP1	YKL096W	GAL11	P19659	1081 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	DEP1	P31385	405 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	MGS1	P40151	587 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	SER33	P40510	469 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	AXL1	P40851	1208 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	NMA2	P53204	395 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	ARP4	P80428	489 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	CIA1	Q05583	330 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	YPR084W	Q06821	456 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	HBT1	Q07653	1046 aa	Known RBP	11.34	□□□□□ -0.59
CWP1	YKL096W	BUD7	Q08754	746 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	UBX3	Q12229	455 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	MDY2	Q12285	212 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	RIB2	Q12362	591 aa	Known RBP	11.34	□□□□□ -0.59
CWP1	YKL096W	ICT1	Q12385	394 aa		11.34	□□□□□ -0.59
CWP1	YKL096W	FAB1	P34756	2278 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	CET1	O13297	549 aa	Predicted RBP	11.33	□□□□□ -0.6
CWP1	YKL096W	COX6	P00427	148 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	SEC53	P07283	254 aa	Known RBP	11.33	□□□□□ -0.6
CWP1	YKL096W	FUS1	P11710	512 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	PRP16	P15938	1071 aa	Predicted RBP	11.33	□□□□□ -0.6
CWP1	YKL096W	VAC17	P25591	423 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	THI80	P35202	319 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	ASK1	P35734	292 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	RRN3	P36070	627 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	CTP1	P38152	299 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	SPO20	Q04359	397 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	ENT4	Q07872	247 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	TGL5	Q12043	749 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	STB3	Q12427	513 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	YPL247C	Q12523	523 aa		11.33	□□□□□ -0.6
CWP1	YKL096W	YPR089W	O13585	888 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	RHO2	P06781	192 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	HSC82	P15108	705 aa	Known RBP	11.32	□□□□□ -0.6
CWP1	YKL096W	YCR090C	P25654	182 aa	Known RBP	11.32	□□□□□ -0.6
CWP1	YKL096W	PTM1	P32857	523 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	STN1	P38960	494 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	NUP84	P52891	726 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	AIF1	P52923	378 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	YMR102C	Q03177	834 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	CRN1	Q06440	651 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	UPC2	Q12151	913 aa		11.32	□□□□□ -0.6
CWP1	YKL096W	RPB4	P20433	221 aa	Predicted RBP	11.31	□□□□□ -0.6
CWP1	YKL096W	RPC19	P28000	142 aa	Known RBP	11.31	□□□□□ -0.6
CWP1	YKL096W	PRP18	P33411	251 aa	Predicted RBP	11.31	□□□□□ -0.6
CWP1	YKL096W	DBP8	P38719	431 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
CWP1	YKL096W	IRR1	P40541	1150 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	COG7	P53195	279 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	SWC4	P53201	476 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	NHP10	Q03435	203 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	GOT1	Q03554	138 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	RCO1	Q04779	684 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	SEC10	Q06245	871 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	YOL019W	Q08157	551 aa		11.31	□□□□□ -0.6
CWP1	YKL096W	SMF3	Q12078	473 aa	Predicted RBP	11.31	□□□□□ -0.6
CWP1	YKL096W	ARP1	P38696	384 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	GDH3	P39708	457 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	MTO1	P53070	669 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	11.3	□□□□□ -0.6	not detected
CWP1	YKL096W	OSH6	Q02201	448 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	FMN1	Q03778	218 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	RPC11	Q04307	110 aa	Predicted RBP	11.3	□□□□□ -0.6
CWP1	YKL096W	YOR012W	Q12351	137 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	GTT2	Q12390	233 aa		11.3	□□□□□ -0.6
CWP1	YKL096W	SBP1	P10080	294 aa	Known RBP	11.29	□□□□□ -0.6
CWP1	YKL096W	EPT1	P22140	391 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	VAN1	P23642	535 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	NPP1	P25353	742 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	GUT1	P32190	709 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	SFP1	P32432	683 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	TIP20	P33891	701 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	SPT23	P35210	1082 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	EFM1	P38732	585 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	PCL5	P38794	229 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	SEC31	P38968	1273 aa	Known RBP	11.29	□□□□□ -0.6
CWP1	YKL096W	GAT1	P43574	510 aa		11.29	□□□□□ -0.6
CWP1	YKL096W	DAN4	P47179	1161 aa		11.29	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms