RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W PKP1P40530 394 aa4.5□□□□□ -1.69
TFA1YKL028W IME4P41833 600 aa4.5□□□□□ -1.69
TFA1YKL028W IDS2P46958 469 aa4.5□□□□□ -1.69
TFA1YKL028W ALT2P52892 507 aa4.5□□□□□ -1.69
TFA1YKL028W COS12P53053 380 aa4.5□□□□□ -1.69
TFA1YKL028W RPN14P53196 417 aa4.5□□□□□ -1.69
TFA1YKL028W SUN4P53616 420 aa4.5□□□□□ -1.69
TFA1YKL028W RRN5Q02983 363 aa4.5□□□□□ -1.69
TFA1YKL028W WHI4Q07655 649 aaKnown RBP4.5□□□□□ -1.69
TFA1YKL028W SWT1Q12104 458 aa4.5□□□□□ -1.69
TFA1YKL028W AVL9Q12500 764 aa4.5□□□□□ -1.69
TFA1YKL028W ECM3Q99252 613 aa4.5□□□□□ -1.69
TFA1YKL028W SNT1P25357 1226 aa4.49□□□□□ -1.69
TFA1YKL028W YIH1P25637 258 aa4.49□□□□□ -1.69
TFA1YKL028W SRB5P32585 307 aa4.49□□□□□ -1.69
TFA1YKL028W PMT1P33775 817 aa4.49□□□□□ -1.69
TFA1YKL028W SRB2P34162 210 aa4.49□□□□□ -1.69
TFA1YKL028W LST4P34239 828 aa4.49□□□□□ -1.69
TFA1YKL028W HSM3P38348 480 aa4.49□□□□□ -1.69
TFA1YKL028W YDR089WP38966 869 aa4.49□□□□□ -1.69
TFA1YKL028W MND2P40577 368 aa4.49□□□□□ -1.69
TFA1YKL028W PET130P47065 347 aa4.49□□□□□ -1.69
TFA1YKL028W YGL036WP53185 909 aaPredicted RBP4.49□□□□□ -1.69
TFA1YKL028W TWF1P53250 332 aa4.49□□□□□ -1.69
TFA1YKL028W TOF2Q02208 771 aa4.49□□□□□ -1.69
TFA1YKL028W YBR085C-AO43137 85 aa4.48□□□□□ -1.69
TFA1YKL028W GAL80P04387 435 aa4.48□□□□□ -1.69
TFA1YKL028W RPL6BP05739 176 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W CDC6P09119 513 aa4.48□□□□□ -1.69
TFA1YKL028W TUB3P09734 445 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W SEC15P22224 910 aa4.48□□□□□ -1.69
TFA1YKL028W ERG6P25087 383 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W PHO91P27514 894 aa4.48□□□□□ -1.69
TFA1YKL028W SEC66P33754 206 aa4.48□□□□□ -1.69
TFA1YKL028W MRPL40P36534 297 aa4.48□□□□□ -1.69
TFA1YKL028W AGP2P38090 596 aa4.48□□□□□ -1.69
TFA1YKL028W GDT1P38301 280 aaPredicted RBP4.48□□□□□ -1.69
TFA1YKL028W WSS1P38838 269 aa4.48□□□□□ -1.69
TFA1YKL028W MSS4P38994 779 aa4.48□□□□□ -1.69
TFA1YKL028W YJL193WP39542 402 aa4.48□□□□□ -1.69
TFA1YKL028W NUP60P39705 539 aa4.48□□□□□ -1.69
TFA1YKL028W LRO1P40345 661 aa4.48□□□□□ -1.69
TFA1YKL028W URM1P40554 99 aaPredicted RBP4.48□□□□□ -1.69
TFA1YKL028W CHS6P40955 746 aa4.48□□□□□ -1.69
TFA1YKL028W LAM5P43560 674 aa4.48□□□□□ -1.69
TFA1YKL028W AGX1P43567 385 aa4.48□□□□□ -1.69
TFA1YKL028W NUP84P52891 726 aa4.48□□□□□ -1.69
TFA1YKL028W STR3P53101 465 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W MLC1P53141 149 aa4.48□□□□□ -1.69
TFA1YKL028W RPL6AQ02326 176 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W VTA1Q06263 330 aa4.48□□□□□ -1.69
TFA1YKL028W ACK1Q07622 623 aaPredicted RBP4.48□□□□□ -1.69
TFA1YKL028W DIA2Q08496 732 aaPredicted RBP4.48□□□□□ -1.69
TFA1YKL028W DCI1Q08558 271 aa4.48□□□□□ -1.69
TFA1YKL028W UAF30Q08747 228 aa4.48□□□□□ -1.69
TFA1YKL028W LEU9Q12166 604 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W HRP1Q99383 534 aaKnown RBP4.48□□□□□ -1.69
TFA1YKL028W TPK2P06245 380 aa4.47□□□□□ -1.69
TFA1YKL028W HOM2P13663 365 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W VPS34P22543 875 aa4.47□□□□□ -1.69
TFA1YKL028W LRE1P25579 583 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W YCR061WP25639 631 aa4.47□□□□□ -1.69
TFA1YKL028W DSS4P32601 143 aa4.47□□□□□ -1.69
TFA1YKL028W MRE11P32829 692 aa4.47□□□□□ -1.69
TFA1YKL028W NIP100P33420 868 aa4.47□□□□□ -1.69
TFA1YKL028W THI2P38141 450 aa4.47□□□□□ -1.69
TFA1YKL028W YNG2P38806 282 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W SMC2P38989 1170 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W YJL206CP39529 758 aa4.47□□□□□ -1.69
TFA1YKL028W SEC24P40482 926 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W HXT14P42833 540 aa4.47□□□□□ -1.69
TFA1YKL028W ALK1P43633 760 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W CTK2P46962 323 aa4.47□□□□□ -1.69
TFA1YKL028W BPL1P48445 690 aaPredicted RBP4.47□□□□□ -1.69
TFA1YKL028W CTR1P49573 406 aa4.47□□□□□ -1.69
TFA1YKL028W MNN10P50108 393 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W VID30P53076 958 aa4.47□□□□□ -1.69
TFA1YKL028W MCM6P53091 1017 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W CUE3P53137 624 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W BOP3P53958 396 aa4.47□□□□□ -1.69
TFA1YKL028W INA17Q02888 182 aa4.47□□□□□ -1.69
TFA1YKL028W BUD22Q04347 519 aaKnown RBP4.47□□□□□ -1.69
TFA1YKL028W HOF1Q05080 669 aa4.47□□□□□ -1.69
TFA1YKL028W ARR3Q06598 404 aa4.47□□□□□ -1.69
TFA1YKL028W ATG23Q06671 453 aa4.47□□□□□ -1.69
TFA1YKL028W RXT3Q07458 294 aa4.47□□□□□ -1.69
TFA1YKL028W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
TFA1YKL028W CFT2Q12102 859 aaPredicted RBP4.47□□□□□ -1.69
TFA1YKL028W NTO1Q12311 748 aa4.47□□□□□ -1.69
TFA1YKL028W SWM1Q12379 170 aa4.47□□□□□ -1.69
TFA1YKL028W YML003WP0CF16 290 aa4.46□□□□□ -1.69
TFA1YKL028W EST1P17214 699 aaPredicted RBP4.46□□□□□ -1.69
TFA1YKL028W PET123P17558 318 aa4.46□□□□□ -1.69
TFA1YKL028W PEX1P24004 1043 aa4.46□□□□□ -1.69
TFA1YKL028W CDC15P27636 974 aa4.46□□□□□ -1.69
TFA1YKL028W PMI40P29952 429 aaKnown RBP4.46□□□□□ -1.69
TFA1YKL028W PDB1P32473 366 aaKnown RBP4.46□□□□□ -1.69
TFA1YKL028W WBP1P33767 430 aaKnown RBP4.46□□□□□ -1.69
TFA1YKL028W DEF1P35732 738 aaKnown RBP4.46□□□□□ -1.69
TFA1YKL028W SLM4P38247 162 aa4.46□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms