RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W CBR1P38626 284 aaKnown RBP5.3□□□□□ -1.56
RPB4YJL140W LCP5P40079 357 aaPredicted RBP5.3□□□□□ -1.56
RPB4YJL140W YIL161WP40449 235 aaKnown RBP5.3□□□□□ -1.56
RPB4YJL140W RPA49Q01080 415 aaPredicted RBP5.3□□□□□ -1.56
RPB4YJL140W CEG1Q01159 459 aaPredicted RBP5.3□□□□□ -1.56
RPB4YJL140W MTD1Q02046 320 aaKnown RBP5.3□□□□□ -1.56
RPB4YJL140W MUB1Q03162 620 aa5.3□□□□□ -1.56
RPB4YJL140W SEG1Q04279 960 aa5.3□□□□□ -1.56
RPB4YJL140W VTI1Q04338 217 aa5.3□□□□□ -1.56
RPB4YJL140W YDR514CQ04408 483 aa5.3□□□□□ -1.56
RPB4YJL140W ECI1Q05871 280 aa5.3□□□□□ -1.56
RPB4YJL140W ECM3Q99252 613 aa5.3□□□□□ -1.56
RPB4YJL140W AI5_BETAQ9ZZX0 354 aa5.3□□□□□ -1.56
RPB4YJL140W GAL11P19659 1081 aa5.29□□□□□ -1.56
RPB4YJL140W CAP1P28495 268 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W CNS1P33313 385 aa5.29□□□□□ -1.56
RPB4YJL140W CSG2P35206 410 aa5.29□□□□□ -1.56
RPB4YJL140W BLI1P35727 113 aa5.29□□□□□ -1.56
RPB4YJL140W CAB3P36076 571 aa5.29□□□□□ -1.56
RPB4YJL140W TCD2P36101 447 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W RRT2P38332 387 aa5.29□□□□□ -1.56
RPB4YJL140W TIF5P38431 405 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W RSP5P39940 809 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W ELO3P40319 345 aa5.29□□□□□ -1.56
RPB4YJL140W YNL320WP42840 284 aa5.29□□□□□ -1.56
RPB4YJL140W GUF1P46943 645 aa5.29□□□□□ -1.56
RPB4YJL140W PHO86P46956 311 aa5.29□□□□□ -1.56
RPB4YJL140W ATG36P46983 293 aa5.29□□□□□ -1.56
RPB4YJL140W RPC17P47076 161 aa5.29□□□□□ -1.56
RPB4YJL140W AMA1P50082 593 aa5.29□□□□□ -1.56
RPB4YJL140W YGR111WP53265 400 aa5.29□□□□□ -1.56
RPB4YJL140W JJJ1P53863 590 aa5.29□□□□□ -1.56
RPB4YJL140W TOF2Q02208 771 aa5.29□□□□□ -1.56
RPB4YJL140W NOP6Q07623 225 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W ABP140Q08641 628 aaKnown RBP5.29□□□□□ -1.56
RPB4YJL140W FRE5Q08908 694 aa5.29□□□□□ -1.56
RPB4YJL140W NUR1Q12066 484 aa5.29□□□□□ -1.56
RPB4YJL140W GIS3Q12418 502 aa5.29□□□□□ -1.56
RPB4YJL140W ZRT2Q12436 422 aa5.29□□□□□ -1.56
RPB4YJL140W YLR462WO13556 202 aa5.28□□□□□ -1.56
RPB4YJL140W RAD1P06777 1100 aa5.28□□□□□ -1.56
RPB4YJL140W KAR3P17119 729 aa5.28□□□□□ -1.56
RPB4YJL140W ATG12P38316 186 aa5.28□□□□□ -1.56
RPB4YJL140W YHL049CP38722 271 aa5.28□□□□□ -1.56
RPB4YJL140W TDA3P38758 523 aa5.28□□□□□ -1.56
RPB4YJL140W PCF11P39081 626 aaPredicted RBP5.28□□□□□ -1.56
RPB4YJL140W CIN4P39110 191 aa5.28□□□□□ -1.56
RPB4YJL140W YEL075CP39972 122 aa5.28□□□□□ -1.56
RPB4YJL140W AVT2P39981 480 aa5.28□□□□□ -1.56
RPB4YJL140W YER189WP40104 122 aa5.28□□□□□ -1.56
RPB4YJL140W ASG1P40467 964 aa5.28□□□□□ -1.56
RPB4YJL140W YFL064CP43540 174 aa5.28□□□□□ -1.56
RPB4YJL140W RMD8P43620 662 aa5.28□□□□□ -1.56
RPB4YJL140W NMD5P46970 1048 aa5.28□□□□□ -1.56
RPB4YJL140W SSY5P47002 699 aa5.28□□□□□ -1.56
RPB4YJL140W ATP25Q03153 612 aa5.28□□□□□ -1.56
RPB4YJL140W MZM1Q03429 123 aaPredicted RBP5.28□□□□□ -1.56
RPB4YJL140W TDA9Q04545 1251 aa5.28□□□□□ -1.56
RPB4YJL140W SFH1Q06168 426 aa5.28□□□□□ -1.56
RPB4YJL140W RSC3Q06639 885 aa5.28□□□□□ -1.56
RPB4YJL140W AIM41Q12032 185 aa5.28□□□□□ -1.56
RPB4YJL140W YBL111CQ3E7Y5 667 aa5.28□□□□□ -1.56
RPB4YJL140W ACC1Q00955 2233 aaKnown RBP5.27□□□□□ -1.57
RPB4YJL140W CDC8P00572 216 aa5.27□□□□□ -1.57
RPB4YJL140W BI2P03873 423 aa5.27□□□□□ -1.57
RPB4YJL140W RPS3P05750 240 aaKnown RBP5.27□□□□□ -1.57
RPB4YJL140W COX11P19516 300 aaKnown RBP5.27□□□□□ -1.57
RPB4YJL140W KIN3P22209 435 aa5.27□□□□□ -1.57
RPB4YJL140W LRE1P25579 583 aaKnown RBP5.27□□□□□ -1.57
RPB4YJL140W DBF4P32325 704 aa5.27□□□□□ -1.57
RPB4YJL140W BET3P36149 193 aa5.27□□□□□ -1.57
RPB4YJL140W YBR225WP38321 900 aa5.27□□□□□ -1.57
RPB4YJL140W END3P39013 349 aa5.27□□□□□ -1.57
RPB4YJL140W GDH3P39708 457 aa5.27□□□□□ -1.57
RPB4YJL140W DRN1P53255 507 aaKnown RBP5.27□□□□□ -1.57
RPB4YJL140W MUS81Q04149 632 aaPredicted RBP5.27□□□□□ -1.57
RPB4YJL140W UFO1Q04511 668 aa5.27□□□□□ -1.57
RPB4YJL140W ECM22Q05958 814 aaPredicted RBP5.27□□□□□ -1.57
RPB4YJL140W THI21Q08975 551 aa5.27□□□□□ -1.57
RPB4YJL140W NBP2Q12163 236 aa5.27□□□□□ -1.57
RPB4YJL140W BI3Q9ZZW7 517 aa5.27□□□□□ -1.57
RPB4YJL140W ARG4P04076 463 aaPredicted RBP5.26□□□□□ -1.57
RPB4YJL140W PRP4P20053 465 aaKnown RBP5.26□□□□□ -1.57
RPB4YJL140W DSS4P32601 143 aa5.26□□□□□ -1.57
RPB4YJL140W YBL055CP34220 418 aaPredicted RBP5.26□□□□□ -1.57
RPB4YJL140W PBP2P38151 413 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RPB4YJL140W YPT35P38815 214 aaKnown RBP5.26□□□□□ -1.57
RPB4YJL140W SPC72P39723 622 aa5.26□□□□□ -1.57
RPB4YJL140W DSE1P40077 573 aa5.26□□□□□ -1.57
RPB4YJL140W ERG10P41338 398 aaKnown RBP5.26□□□□□ -1.57
RPB4YJL140W FKH2P41813 862 aa5.26□□□□□ -1.57
RPB4YJL140W ASG7P46993 209 aa5.26□□□□□ -1.57
RPB4YJL140W LRS4Q04087 347 aaKnown RBP5.26□□□□□ -1.57
RPB4YJL140W DDC1Q08949 612 aa5.26□□□□□ -1.57
RPB4YJL140W APL5Q08951 932 aaKnown RBP5.26□□□□□ -1.57
RPB4YJL140W TRM13Q12383 476 aa5.26□□□□□ -1.57
RPB4YJL140W RAD10P06838 210 aa5.25□□□□□ -1.57
RPB4YJL140W REV1P12689 985 aa5.25□□□□□ -1.57
RPB4YJL140W FPR1P20081 114 aaKnown RBP5.25□□□□□ -1.57
RPB4YJL140W SAT4P25333 603 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms