RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W RRP3P38712 501 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W TDA3P38758 523 aa6.31□□□□□ -1.4
PRE3YJL001W SKN7P38889 622 aa6.31□□□□□ -1.4
PRE3YJL001W SAP185P40856 1058 aa6.31□□□□□ -1.4
PRE3YJL001W YFL054CP43549 646 aa6.31□□□□□ -1.4
PRE3YJL001W PRY1P47032 299 aa6.31□□□□□ -1.4
PRE3YJL001W ARI1P53111 347 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W YGR266WP53326 701 aa6.31□□□□□ -1.4
PRE3YJL001W BET4Q00618 327 aa6.31□□□□□ -1.4
PRE3YJL001W SND1Q04007 877 aa6.31□□□□□ -1.4
PRE3YJL001W YDR222WQ04925 415 aa6.31□□□□□ -1.4
PRE3YJL001W YPR078CQ06813 372 aa6.31□□□□□ -1.4
PRE3YJL001W ATG10Q07879 167 aa6.31□□□□□ -1.4
PRE3YJL001W APL5Q08951 932 aaKnown RBP6.31□□□□□ -1.4
PRE3YJL001W MIH1P23748 554 aa6.3□□□□□ -1.4
PRE3YJL001W ALY1P36117 915 aa6.3□□□□□ -1.4
PRE3YJL001W PSY4P38193 441 aa6.3□□□□□ -1.4
PRE3YJL001W MUM2P38236 366 aa6.3□□□□□ -1.4
PRE3YJL001W RAD26P40352 1085 aa6.3□□□□□ -1.4
PRE3YJL001W PAN6P40459 309 aa6.3□□□□□ -1.4
PRE3YJL001W YIL054WP40524 105 aa6.3□□□□□ -1.4
PRE3YJL001W SET2P46995 733 aaKnown RBP6.3□□□□□ -1.4
PRE3YJL001W ASN2P49090 572 aaKnown RBP6.3□□□□□ -1.4
PRE3YJL001W IPI3P53877 555 aa6.3□□□□□ -1.4
PRE3YJL001W TFB2Q02939 513 aa6.3□□□□□ -1.4
PRE3YJL001W YDR131CQ03899 556 aa6.3□□□□□ -1.4
PRE3YJL001W SXM1Q04175 944 aaKnown RBP6.3□□□□□ -1.4
PRE3YJL001W KAP95Q06142 861 aaKnown RBP6.3□□□□□ -1.4
PRE3YJL001W YDL073WQ07454 984 aa6.3□□□□□ -1.4
PRE3YJL001W TMA16Q08687 178 aa6.3□□□□□ -1.4
PRE3YJL001W YOR389WQ08912 624 aa6.3□□□□□ -1.4
PRE3YJL001W THI21Q08975 551 aa6.3□□□□□ -1.4
PRE3YJL001W YPL278CQ08990 100 aa6.3□□□□□ -1.4
PRE3YJL001W YDR061WQ12298 539 aa6.3□□□□□ -1.4
PRE3YJL001W SFI1Q12369 946 aa6.3□□□□□ -1.4
PRE3YJL001W UTP20P35194 2493 aaKnown RBP6.3□□□□□ -1.4
PRE3YJL001W AAT2P23542 418 aaKnown RBP6.29□□□□□ -1.4
PRE3YJL001W MNE1P24720 663 aa6.29□□□□□ -1.4
PRE3YJL001W BAP2P38084 609 aa6.29□□□□□ -1.4
PRE3YJL001W CCZ1P38273 704 aa6.29□□□□□ -1.4
PRE3YJL001W YHL012WP38709 493 aa6.29□□□□□ -1.4
PRE3YJL001W MMM1P41800 426 aa6.29□□□□□ -1.4
PRE3YJL001W YMR178WQ03219 274 aaKnown RBP6.29□□□□□ -1.4
PRE3YJL001W YPR114WQ06107 315 aa6.29□□□□□ -1.4
PRE3YJL001W ETT1Q08421 412 aaKnown RBP6.29□□□□□ -1.4
PRE3YJL001W MDM12Q92328 271 aa6.29□□□□□ -1.4
PRE3YJL001W MTF2P10849 440 aa6.28□□□□□ -1.4
PRE3YJL001W ABF1P14164 731 aa6.28□□□□□ -1.4
PRE3YJL001W CWP1P28319 239 aa6.28□□□□□ -1.4
PRE3YJL001W UBS1P38290 277 aa6.28□□□□□ -1.4
PRE3YJL001W SWC5P38326 303 aa6.28□□□□□ -1.4
PRE3YJL001W DSS1P39112 969 aa6.28□□□□□ -1.4
PRE3YJL001W ELO1P39540 310 aa6.28□□□□□ -1.4
PRE3YJL001W TMN3P40071 706 aa6.28□□□□□ -1.4
PRE3YJL001W TOK1P40310 691 aa6.28□□□□□ -1.4
PRE3YJL001W DLD2P46681 530 aaKnown RBP6.28□□□□□ -1.4
PRE3YJL001W LSP1Q12230 341 aaKnown RBP6.28□□□□□ -1.4
PRE3YJL001W YVC1Q12324 675 aa6.28□□□□□ -1.4
PRE3YJL001W AFI1Q99222 893 aa6.28□□□□□ -1.4
PRE3YJL001W INH1P01097 85 aa6.27□□□□□ -1.41
PRE3YJL001W MPH2P0CD99 609 aa6.27□□□□□ -1.41
PRE3YJL001W SEC15P22224 910 aa6.27□□□□□ -1.41
PRE3YJL001W AIM26P32858 118 aa6.27□□□□□ -1.41
PRE3YJL001W AFR1P33304 620 aa6.27□□□□□ -1.41
PRE3YJL001W REC104P33323 182 aa6.27□□□□□ -1.41
PRE3YJL001W TOM20P35180 183 aa6.27□□□□□ -1.41
PRE3YJL001W YEL028WP39989 153 aa6.27□□□□□ -1.41
PRE3YJL001W YGR111WP53265 400 aa6.27□□□□□ -1.41
PRE3YJL001W VAC7P53950 1165 aa6.27□□□□□ -1.41
PRE3YJL001W PPN1Q04119 674 aa6.27□□□□□ -1.41
PRE3YJL001W TRE2Q08693 809 aa6.27□□□□□ -1.41
PRE3YJL001W GPM3Q12326 303 aa6.27□□□□□ -1.41
PRE3YJL001W SKM1Q12469 655 aa6.27□□□□□ -1.41
PRE3YJL001W YKR104WP0CE69 306 aa6.26□□□□□ -1.41
PRE3YJL001W PMA2P19657 947 aa6.26□□□□□ -1.41
PRE3YJL001W MEF1P25039 761 aa6.26□□□□□ -1.41
PRE3YJL001W NPP1P25353 742 aa6.26□□□□□ -1.41
PRE3YJL001W SNT1P25357 1226 aa6.26□□□□□ -1.41
PRE3YJL001W ERP2P39704 215 aa6.26□□□□□ -1.41
PRE3YJL001W YEN1P40028 759 aa6.26□□□□□ -1.41
PRE3YJL001W RRT5P43607 289 aa6.26□□□□□ -1.41
PRE3YJL001W RPS10BP46784 105 aaKnown RBP6.26□□□□□ -1.41
PRE3YJL001W HLJ1P48353 224 aa6.26□□□□□ -1.41
PRE3YJL001W TRF5P48561 642 aaKnown RBP6.26□□□□□ -1.41
PRE3YJL001W NRD1P53617 575 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
PRE3YJL001W SWC7Q06707 132 aa6.26□□□□□ -1.41
PRE3YJL001W CMS1Q07897 291 aaKnown RBP6.26□□□□□ -1.41
PRE3YJL001W RPS10AQ08745 105 aaPredicted RBP6.26□□□□□ -1.41
PRE3YJL001W YDR215CQ12240 137 aa6.26□□□□□ -1.41
PRE3YJL001W OCA6Q12454 224 aa6.26□□□□□ -1.41
PRE3YJL001W YOR338WQ99326 363 aa6.26□□□□□ -1.41
PRE3YJL001W IZH4Q99393 312 aa6.26□□□□□ -1.41
PRE3YJL001W SCH9P11792 824 aaKnown RBP6.25□□□□□ -1.41
PRE3YJL001W GLN4P13188 809 aaKnown RBP6.25□□□□□ -1.41
PRE3YJL001W SAM35P14693 329 aa6.25□□□□□ -1.41
PRE3YJL001W TRX1P22217 103 aaKnown RBP6.25□□□□□ -1.41
PRE3YJL001W SPC110P32380 944 aa6.25□□□□□ -1.41
PRE3YJL001W VFA1P40080 203 aa6.25□□□□□ -1.41
PRE3YJL001W CTK3P46963 296 aaPredicted RBP6.25□□□□□ -1.41
PRE3YJL001W YJL132WP47014 750 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms