RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W YOL159CQ08300 171 aa3.86□□□□□ -1.79
CTM1YHR109W LCB4Q12246 624 aa3.86□□□□□ -1.79
CTM1YHR109W ISN1Q99312 450 aa3.86□□□□□ -1.79
CTM1YHR109W SGS1P35187 1447 aa3.86□□□□□ -1.79
CTM1YHR109W CHO2P05374 869 aaKnown RBP3.85□□□□□ -1.79
CTM1YHR109W KGD2P19262 463 aaPredicted RBP3.85□□□□□ -1.79
CTM1YHR109W MRPL9P31334 269 aa3.85□□□□□ -1.79
CTM1YHR109W PDB1P32473 366 aaKnown RBP3.85□□□□□ -1.79
CTM1YHR109W MDL1P33310 695 aa3.85□□□□□ -1.79
CTM1YHR109W DEF1P35732 738 aaKnown RBP3.85□□□□□ -1.79
CTM1YHR109W GIP4P39732 760 aa3.85□□□□□ -1.79
CTM1YHR109W IMD4P50094 524 aaKnown RBP3.85□□□□□ -1.79
CTM1YHR109W SMX3P54999 86 aaPredicted RBP3.85□□□□□ -1.79
CTM1YHR109W CIK1Q01649 594 aa3.85□□□□□ -1.79
CTM1YHR109W MAK10Q02197 733 aa3.85□□□□□ -1.79
CTM1YHR109W OAZ1Q02803 292 aa3.85□□□□□ -1.79
CTM1YHR109W MUK1Q02866 612 aa3.85□□□□□ -1.79
CTM1YHR109W PLM2Q04383 521 aa3.85□□□□□ -1.79
CTM1YHR109W YDL073WQ07454 984 aa3.85□□□□□ -1.79
CTM1YHR109W ATG29Q12092 213 aa3.85□□□□□ -1.79
CTM1YHR109W BAG7Q12128 409 aa3.85□□□□□ -1.79
CTM1YHR109W HIF1Q12373 385 aa3.85□□□□□ -1.79
CTM1YHR109W MDM20Q12387 796 aaKnown RBP3.85□□□□□ -1.79
CTM1YHR109W MRP13P12686 339 aa3.84□□□□□ -1.79
CTM1YHR109W YCR051WP25631 222 aa3.84□□□□□ -1.79
CTM1YHR109W TIF3P34167 436 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W TCD2P36101 447 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W ARG2P40360 574 aa3.84□□□□□ -1.79
CTM1YHR109W STR3P53101 465 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W COG2P53271 262 aa3.84□□□□□ -1.79
CTM1YHR109W DCP2P53550 970 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W WAR1Q03631 944 aa3.84□□□□□ -1.79
CTM1YHR109W ROY1Q04847 553 aa3.84□□□□□ -1.79
CTM1YHR109W CRT10Q08226 957 aa3.84□□□□□ -1.79
CTM1YHR109W BMS1Q08965 1183 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W RLM1Q12224 676 aa3.84□□□□□ -1.79
CTM1YHR109W PDH1Q12428 516 aaKnown RBP3.84□□□□□ -1.79
CTM1YHR109W ZPS1Q12512 249 aa3.84□□□□□ -1.79
CTM1YHR109W AFI1Q99222 893 aa3.84□□□□□ -1.79
CTM1YHR109W RRP7P25368 297 aaPredicted RBP3.84□□□□□ -1.8
CTM1YHR109W URA7P28274 579 aaKnown RBP3.84□□□□□ -1.8
CTM1YHR109W PAP1P29468 568 aaKnown RBP3.84□□□□□ -1.8
CTM1YHR109W GLG1P36143 616 aa3.84□□□□□ -1.8
CTM1YHR109W ADE17P38009 592 aaKnown RBP3.84□□□□□ -1.8
CTM1YHR109W VBA2P38358 474 aaKnown RBP3.84□□□□□ -1.8
CTM1YHR109W GDI1P39958 451 aaKnown RBP3.84□□□□□ -1.8
CTM1YHR109W MIT1P40002 666 aa3.84□□□□□ -1.8
CTM1YHR109W YFR020WP43600 232 aa3.84□□□□□ -1.8
CTM1YHR109W VID30P53076 958 aa3.84□□□□□ -1.8
CTM1YHR109W COQ6P53318 479 aa3.84□□□□□ -1.8
CTM1YHR109W OGG1P53397 376 aaPredicted RBP3.84□□□□□ -1.8
CTM1YHR109W AVL9Q12500 764 aa3.84□□□□□ -1.8
CTM1YHR109W SEC3P33332 1336 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W RTC1Q08281 1341 aa3.83□□□□□ -1.8
CTM1YHR109W PET111P08468 800 aa3.83□□□□□ -1.8
CTM1YHR109W WHI2P12611 486 aa3.83□□□□□ -1.8
CTM1YHR109W RPL3P14126 387 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W PDA1P16387 420 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W RPS0AP32905 252 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W SOF1P33750 489 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W WBP1P33767 430 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W SEF1P34228 1148 aa3.83□□□□□ -1.8
CTM1YHR109W AAP1P37898 856 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W LAS21P40367 830 aa3.83□□□□□ -1.8
CTM1YHR109W SEC28P40509 296 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W EFM4P40516 257 aa3.83□□□□□ -1.8
CTM1YHR109W DIA3P52290 468 aa3.83□□□□□ -1.8
CTM1YHR109W RPA49Q01080 415 aaPredicted RBP3.83□□□□□ -1.8
CTM1YHR109W ARG7Q04728 441 aa3.83□□□□□ -1.8
CTM1YHR109W HRD3Q05787 833 aa3.83□□□□□ -1.8
CTM1YHR109W PGC1Q08959 321 aa3.83□□□□□ -1.8
CTM1YHR109W FMP40Q08968 688 aaPredicted RBP3.83□□□□□ -1.8
CTM1YHR109W SMF3Q12078 473 aaPredicted RBP3.83□□□□□ -1.8
CTM1YHR109W GPM3Q12326 303 aa3.83□□□□□ -1.8
CTM1YHR109W AHA1Q12449 350 aaKnown RBP3.83□□□□□ -1.8
CTM1YHR109W YML133CQ03099 1374 aa3.82□□□□□ -1.8
CTM1YHR109W YLL067CQ07888 1374 aa3.82□□□□□ -1.8
CTM1YHR109W YLL066CQ99208 1374 aa3.82□□□□□ -1.8
CTM1YHR109W CYB2P00175 591 aa3.82□□□□□ -1.8
CTM1YHR109W TPM1P17536 199 aaKnown RBP3.82□□□□□ -1.8
CTM1YHR109W LHS1P36016 881 aa3.82□□□□□ -1.8
CTM1YHR109W CMC1P36064 111 aa3.82□□□□□ -1.8
CTM1YHR109W YMC2P38087 329 aa3.82□□□□□ -1.8
CTM1YHR109W YNG2P38806 282 aaKnown RBP3.82□□□□□ -1.8
CTM1YHR109W SEC31P38968 1273 aaKnown RBP3.82□□□□□ -1.8
CTM1YHR109W ECM10P39987 644 aa3.82□□□□□ -1.8
CTM1YHR109W ALG5P40350 334 aa3.82□□□□□ -1.8
CTM1YHR109W CCT7P42943 550 aaKnown RBP3.82□□□□□ -1.8
CTM1YHR109W YFL015CP43578 164 aa3.82□□□□□ -1.8
CTM1YHR109W TCB2P48231 1178 aa3.82□□□□□ -1.8
CTM1YHR109W HOS2P53096 452 aaPredicted RBP3.82□□□□□ -1.8
CTM1YHR109W AAT1Q01802 451 aa3.82□□□□□ -1.8
CTM1YHR109W KIN4Q01919 800 aa3.82□□□□□ -1.8
CTM1YHR109W DPB4Q04603 196 aaKnown RBP3.82□□□□□ -1.8
CTM1YHR109W MF(ALPHA)1P01149 165 aa3.81□□□□□ -1.8
CTM1YHR109W HXK2P04807 486 aaKnown RBP3.81□□□□□ -1.8
CTM1YHR109W MDH1P17505 334 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
CTM1YHR109W CTS1P29029 562 aa3.81□□□□□ -1.8
CTM1YHR109W SYN8P31377 255 aa3.81□□□□□ -1.8
CTM1YHR109W YJL055WP47044 245 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 86.8 ms