RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C BOL2P53082 120 aa6.49□□□□□ -1.37
YPT1YFL038C GTR2P53290 341 aa6.49□□□□□ -1.37
YPT1YFL038C EFM6P53970 246 aa6.49□□□□□ -1.37
YPT1YFL038C SPO20Q04359 397 aa6.49□□□□□ -1.37
YPT1YFL038C BLS1Q06071 122 aa6.49□□□□□ -1.37
YPT1YFL038C ECM30Q06673 1274 aa6.49□□□□□ -1.37
YPT1YFL038C YPR097WQ06839 1073 aa6.49□□□□□ -1.37
YPT1YFL038C UBX3Q12229 455 aa6.49□□□□□ -1.37
YPT1YFL038C SAS5Q99314 248 aa6.49□□□□□ -1.37
YPT1YFL038C ATP1P07251 545 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C HOP09932 586 aa6.48□□□□□ -1.37
YPT1YFL038C ART10P18634 518 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C ERG6P25087 383 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C BUB2P26448 306 aaPredicted RBP6.48□□□□□ -1.37
YPT1YFL038C GUT2P32191 649 aa6.48□□□□□ -1.37
YPT1YFL038C PTM1P32857 523 aa6.48□□□□□ -1.37
YPT1YFL038C YKR015CP36111 568 aa6.48□□□□□ -1.37
YPT1YFL038C MAK5P38112 773 aaPredicted RBP6.48□□□□□ -1.37
YPT1YFL038C ECM13P38195 257 aa6.48□□□□□ -1.37
YPT1YFL038C SIF2P38262 535 aa6.48□□□□□ -1.37
YPT1YFL038C URA8P38627 578 aaPredicted RBP6.48□□□□□ -1.37
YPT1YFL038C SRP72P38688 640 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C BRL1P38770 471 aa6.48□□□□□ -1.37
YPT1YFL038C YHR131CP38835 850 aa6.48□□□□□ -1.37
YPT1YFL038C NUP60P39705 539 aa6.48□□□□□ -1.37
YPT1YFL038C UBP7P40453 1071 aa6.48□□□□□ -1.37
YPT1YFL038C VHR1P40522 640 aa6.48□□□□□ -1.37
YPT1YFL038C GCN20P43535 752 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C AGP3P43548 558 aa6.48□□□□□ -1.37
YPT1YFL038C BNA3P47039 444 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C PET130P47065 347 aa6.48□□□□□ -1.37
YPT1YFL038C TIM13P53299 105 aa6.48□□□□□ -1.37
YPT1YFL038C DCP2P53550 970 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C TMA20P89886 181 aaPredicted RBP6.48□□□□□ -1.37
YPT1YFL038C ECM9Q02202 377 aa6.48□□□□□ -1.37
YPT1YFL038C YDR179W-AQ03983 463 aa6.48□□□□□ -1.37
YPT1YFL038C RPN9Q04062 393 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C GMC2Q06201 188 aa6.48□□□□□ -1.37
YPT1YFL038C LEA1Q08963 238 aaPredicted RBP6.48□□□□□ -1.37
YPT1YFL038C SAM3Q08986 587 aa6.48□□□□□ -1.37
YPT1YFL038C NUS1Q12063 375 aa6.48□□□□□ -1.37
YPT1YFL038C AHA1Q12449 350 aaKnown RBP6.48□□□□□ -1.37
YPT1YFL038C TOM1Q03280 3268 aa6.48□□□□□ -1.37
YPT1YFL038C TRP3P00937 484 aa6.47□□□□□ -1.37
YPT1YFL038C MST1P07236 462 aa6.47□□□□□ -1.37
YPT1YFL038C BCY1P07278 416 aaKnown RBP6.47□□□□□ -1.37
YPT1YFL038C MSS18P08593 268 aa6.47□□□□□ -1.37
YPT1YFL038C SUI3P09064 285 aaKnown RBP6.47□□□□□ -1.37
YPT1YFL038C SNF4P12904 322 aa6.47□□□□□ -1.37
YPT1YFL038C UGA1P17649 471 aa6.47□□□□□ -1.37
YPT1YFL038C POT1P27796 417 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
YPT1YFL038C KAR9P32526 644 aa6.47□□□□□ -1.37
YPT1YFL038C PTH2P34222 208 aa6.47□□□□□ -1.37
YPT1YFL038C SKT5P34226 696 aa6.47□□□□□ -1.37
YPT1YFL038C ADD66P36040 267 aa6.47□□□□□ -1.37
YPT1YFL038C ECM4P36156 370 aa6.47□□□□□ -1.37
YPT1YFL038C YBR241CP38142 488 aa6.47□□□□□ -1.37
YPT1YFL038C YBL029WP38201 376 aa6.47□□□□□ -1.37
YPT1YFL038C MSC7P38694 644 aa6.47□□□□□ -1.37
YPT1YFL038C ECM10P39987 644 aa6.47□□□□□ -1.37
YPT1YFL038C RGI2P40188 164 aa6.47□□□□□ -1.37
YPT1YFL038C MPH1P40562 993 aa6.47□□□□□ -1.37
YPT1YFL038C YIR007WP40566 764 aa6.47□□□□□ -1.37
YPT1YFL038C VMA13P41807 478 aaKnown RBP6.47□□□□□ -1.37
YPT1YFL038C SPO74P45819 413 aa6.47□□□□□ -1.37
YPT1YFL038C MPS3P47069 682 aa6.47□□□□□ -1.37
YPT1YFL038C DAN4P47179 1161 aa6.47□□□□□ -1.37
YPT1YFL038C MET13P53128 600 aa6.47□□□□□ -1.37
YPT1YFL038C EFM5P53200 248 aaKnown RBP6.47□□□□□ -1.37
YPT1YFL038C GPI1P53306 609 aa6.47□□□□□ -1.37
YPT1YFL038C SKI8Q02793 397 aaPredicted RBP6.47□□□□□ -1.37
YPT1YFL038C YML131WQ03102 365 aa6.47□□□□□ -1.37
YPT1YFL038C MMT1Q03218 510 aa6.47□□□□□ -1.37
YPT1YFL038C CRN1Q06440 651 aa6.47□□□□□ -1.37
YPT1YFL038C NSE1Q07913 336 aa6.47□□□□□ -1.37
YPT1YFL038C YLR012CQ07927 99 aa6.47□□□□□ -1.37
YPT1YFL038C SGT1Q08446 395 aa6.47□□□□□ -1.37
YPT1YFL038C UAF30Q08747 228 aa6.47□□□□□ -1.37
YPT1YFL038C YOR342CQ12182 319 aa6.47□□□□□ -1.37
YPT1YFL038C YDR524C-BQ3E6R4 66 aa6.47□□□□□ -1.37
YPT1YFL038C SEC53P07283 254 aaKnown RBP6.46□□□□□ -1.38
YPT1YFL038C PHO81P17442 1178 aa6.46□□□□□ -1.38
YPT1YFL038C RVS161P25343 265 aaKnown RBP6.46□□□□□ -1.38
YPT1YFL038C SPB1P25582 841 aaPredicted RBP6.46□□□□□ -1.38
YPT1YFL038C YCR099CP25657 155 aa6.46□□□□□ -1.38
YPT1YFL038C NGG1P32494 702 aa6.46□□□□□ -1.38
YPT1YFL038C UGP1P32861 499 aaKnown RBP6.46□□□□□ -1.38
YPT1YFL038C IMP3P32899 183 aaPredicted RBP6.46□□□□□ -1.38
YPT1YFL038C TIF3P34167 436 aaKnown RBP6.46□□□□□ -1.38
YPT1YFL038C MDJ1P35191 511 aa6.46□□□□□ -1.38
YPT1YFL038C CTF13P35203 478 aa6.46□□□□□ -1.38
YPT1YFL038C POA1P38218 177 aa6.46□□□□□ -1.38
YPT1YFL038C DSS1P39112 969 aa6.46□□□□□ -1.38
YPT1YFL038C FAA2P39518 744 aa6.46□□□□□ -1.38
YPT1YFL038C ACO2P39533 789 aa6.46□□□□□ -1.38
YPT1YFL038C SLX8P40072 274 aa6.46□□□□□ -1.38
YPT1YFL038C MET18P40469 1032 aa6.46□□□□□ -1.38
YPT1YFL038C OPT1P40897 799 aa6.46□□□□□ -1.38
YPT1YFL038C YJR154WP47181 346 aa6.46□□□□□ -1.38
YPT1YFL038C MTR3P48240 250 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms