RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W SRO7Q12038 1033 aa7.02□□□□□ -1.29
PDA1YER178W NUS1Q12063 375 aa7.02□□□□□ -1.29
PDA1YER178W TOR1P35169 2470 aa7.02□□□□□ -1.29
PDA1YER178W APA1P16550 321 aaKnown RBP7.01□□□□□ -1.29
PDA1YER178W HSP60P19882 572 aaKnown RBP7.01□□□□□ -1.29
PDA1YER178W EPT1P22140 391 aa7.01□□□□□ -1.29
PDA1YER178W VPS34P22543 875 aa7.01□□□□□ -1.29
PDA1YER178W AAD3P25612 363 aa7.01□□□□□ -1.29
PDA1YER178W CYM1P32898 989 aa7.01□□□□□ -1.29
PDA1YER178W CSE1P33307 960 aa7.01□□□□□ -1.29
PDA1YER178W YKL151CP36059 337 aa7.01□□□□□ -1.29
PDA1YER178W CYC2P38909 366 aa7.01□□□□□ -1.29
PDA1YER178W MNN1P39106 762 aa7.01□□□□□ -1.29
PDA1YER178W YJL070CP40361 888 aa7.01□□□□□ -1.29
PDA1YER178W YIL108WP40483 696 aaKnown RBP7.01□□□□□ -1.29
PDA1YER178W VNX1P42839 908 aa7.01□□□□□ -1.29
PDA1YER178W CIS3P47001 227 aa7.01□□□□□ -1.29
PDA1YER178W SUN4P53616 420 aa7.01□□□□□ -1.29
PDA1YER178W BIO4P53630 237 aa7.01□□□□□ -1.29
PDA1YER178W SWS2P53937 143 aa7.01□□□□□ -1.29
PDA1YER178W GSF2Q04697 403 aaKnown RBP7.01□□□□□ -1.29
PDA1YER178W CIA1Q05583 330 aa7.01□□□□□ -1.29
PDA1YER178W TDA5Q06417 326 aaKnown RBP7.01□□□□□ -1.29
PDA1YER178W RSC2Q06488 889 aa7.01□□□□□ -1.29
PDA1YER178W TRM8Q12009 286 aa7.01□□□□□ -1.29
PDA1YER178W INH1P01097 85 aa7□□□□□ -1.29
PDA1YER178W SEC53P07283 254 aaKnown RBP7□□□□□ -1.29
PDA1YER178W SSC1P0CS90 654 aaKnown RBP7□□□□□ -1.29
PDA1YER178W NRP1P32770 719 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
PDA1YER178W YME1P32795 747 aa7□□□□□ -1.29
PDA1YER178W PEX5P35056 612 aa7□□□□□ -1.29
PDA1YER178W THI80P35202 319 aa7□□□□□ -1.29
PDA1YER178W GMH1P36125 273 aa7□□□□□ -1.29
PDA1YER178W VRP1P37370 817 aa7□□□□□ -1.29
PDA1YER178W SPC97P38863 823 aa7□□□□□ -1.29
PDA1YER178W MGS1P40151 587 aa7□□□□□ -1.29
PDA1YER178W YJL107CP42947 387 aa7□□□□□ -1.29
PDA1YER178W TY4A-JP47023 414 aa7□□□□□ -1.29
PDA1YER178W KTR5P53966 522 aaPredicted RBP7□□□□□ -1.29
PDA1YER178W OSH6Q02201 448 aa7□□□□□ -1.29
PDA1YER178W YMR209CQ03648 457 aa7□□□□□ -1.29
PDA1YER178W ROT1Q03691 256 aa7□□□□□ -1.29
PDA1YER178W EMI1Q04406 187 aa7□□□□□ -1.29
PDA1YER178W NUT2Q06213 157 aa7□□□□□ -1.29
PDA1YER178W YFT2Q06676 274 aa7□□□□□ -1.29
PDA1YER178W HRK1Q08732 759 aaKnown RBP7□□□□□ -1.29
PDA1YER178W RTT10Q08924 1013 aa7□□□□□ -1.29
PDA1YER178W PFA4Q12006 378 aa7□□□□□ -1.29
PDA1YER178W VPS68Q12016 184 aa7□□□□□ -1.29
PDA1YER178W HFA1P32874 2273 aa7□□□□□ -1.29
PDA1YER178W YPR089WO13585 888 aa6.99□□□□□ -1.29
PDA1YER178W RPL40AP0CH08 128 aaKnown RBP6.99□□□□□ -1.29
PDA1YER178W RPL40BP0CH09 128 aaKnown RBP6.99□□□□□ -1.29
PDA1YER178W GPA2P10823 449 aa6.99□□□□□ -1.29
PDA1YER178W VAN1P23642 535 aa6.99□□□□□ -1.29
PDA1YER178W YSW1P38280 609 aa6.99□□□□□ -1.29
PDA1YER178W UBA4P38820 440 aa6.99□□□□□ -1.29
PDA1YER178W IME4P41833 600 aa6.99□□□□□ -1.29
PDA1YER178W STB2P46679 850 aa6.99□□□□□ -1.29
PDA1YER178W SPP2Q02521 185 aa6.99□□□□□ -1.29
PDA1YER178W TRM82Q03774 444 aa6.99□□□□□ -1.29
PDA1YER178W BUD7Q08754 746 aa6.99□□□□□ -1.29
PDA1YER178W UBX3Q12229 455 aa6.99□□□□□ -1.29
PDA1YER178W ICT1Q12385 394 aa6.99□□□□□ -1.29
PDA1YER178W COX3P00420 269 aa6.98□□□□□ -1.29
PDA1YER178W YKR104WP0CE69 306 aa6.98□□□□□ -1.29
PDA1YER178W SPT15P13393 240 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W SNF5P18480 905 aa6.98□□□□□ -1.29
PDA1YER178W RDS2P19541 446 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W ILV6P25605 309 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W HRR25P29295 494 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W PRP18P33411 251 aaPredicted RBP6.98□□□□□ -1.29
PDA1YER178W SLD2P34252 453 aa6.98□□□□□ -1.29
PDA1YER178W TOM20P35180 183 aa6.98□□□□□ -1.29
PDA1YER178W MUD2P36084 527 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W SOL2P37262 315 aa6.98□□□□□ -1.29
PDA1YER178W RRP3P38712 501 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W MUP3P38734 546 aa6.98□□□□□ -1.29
PDA1YER178W OAF1P39720 1047 aaPredicted RBP6.98□□□□□ -1.29
PDA1YER178W PFK26P40433 827 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W HOS4P40480 1083 aa6.98□□□□□ -1.29
PDA1YER178W ARX1Q03862 593 aaKnown RBP6.98□□□□□ -1.29
PDA1YER178W ARG7Q04728 441 aa6.98□□□□□ -1.29
PDA1YER178W CRN1Q06440 651 aa6.98□□□□□ -1.29
PDA1YER178W ADY3Q07732 790 aa6.98□□□□□ -1.29
PDA1YER178W YKL068W-AQ3E826 78 aa6.98□□□□□ -1.29
PDA1YER178W SNT1P25357 1226 aa6.97□□□□□ -1.29
PDA1YER178W RSC6P25632 483 aa6.97□□□□□ -1.29
PDA1YER178W MCM5P29496 775 aaKnown RBP6.97□□□□□ -1.29
PDA1YER178W GCD11P32481 527 aaKnown RBP6.97□□□□□ -1.29
PDA1YER178W RPC37P36121 282 aa6.97□□□□□ -1.29
PDA1YER178W YDR089WP38966 869 aa6.97□□□□□ -1.29
PDA1YER178W MPT5P39016 859 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
PDA1YER178W YEL073CP39974 107 aa6.97□□□□□ -1.29
PDA1YER178W LSM5P40089 93 aaKnown RBP6.97□□□□□ -1.29
PDA1YER178W PEP8P40335 379 aa6.97□□□□□ -1.29
PDA1YER178W LTP1P40347 161 aa6.97□□□□□ -1.29
PDA1YER178W YFR020WP43600 232 aa6.97□□□□□ -1.29
PDA1YER178W YGL108CP53139 140 aa6.97□□□□□ -1.29
PDA1YER178W HST3P53687 447 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms