RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W SDT1P53078 280 aa1.03□□□□□ -2.24
PRP42YDR235W RPM2Q02773 1202 aa1.03□□□□□ -2.24
PRP42YDR235W MTG1Q03151 367 aaPredicted RBP1.03□□□□□ -2.24
PRP42YDR235W RBA50Q04418 439 aa1.03□□□□□ -2.24
PRP42YDR235W ATG23Q06671 453 aa1.03□□□□□ -2.24
PRP42YDR235W SWA2Q06677 668 aa1.03□□□□□ -2.24
PRP42YDR235W YOL159CQ08300 171 aa1.03□□□□□ -2.24
PRP42YDR235W SUL2Q12325 893 aa1.03□□□□□ -2.24
PRP42YDR235W SET6Q12529 373 aa1.03□□□□□ -2.24
PRP42YDR235W KRS1P15180 591 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W LRE1P25579 583 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W ENP1P38333 483 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W YIL060WP40519 144 aa1.02□□□□□ -2.25
PRP42YDR235W RPR2P40571 144 aa1.02□□□□□ -2.25
PRP42YDR235W CTK2P46962 323 aa1.02□□□□□ -2.25
PRP42YDR235W RTT101P47050 842 aa1.02□□□□□ -2.25
PRP42YDR235W PKP2P53170 491 aa1.02□□□□□ -2.25
PRP42YDR235W DCP2P53550 970 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W TDA7P53882 636 aaPredicted RBP1.02□□□□□ -2.25
PRP42YDR235W ERP1Q05359 219 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W HEL2Q05580 639 aaKnown RBP1.02□□□□□ -2.25
PRP42YDR235W STP3Q05937 343 aa1.02□□□□□ -2.25
PRP42YDR235W PET122P10355 254 aa1.01□□□□□ -2.25
PRP42YDR235W SIR1P21691 654 aa1.01□□□□□ -2.25
PRP42YDR235W ACH1P32316 526 aa1.01□□□□□ -2.25
PRP42YDR235W PHD1P36093 366 aa1.01□□□□□ -2.25
PRP42YDR235W RRP3P38712 501 aaKnown RBP1.01□□□□□ -2.25
PRP42YDR235W STT3P39007 718 aaKnown RBP1.01□□□□□ -2.25
PRP42YDR235W TIS11P47977 285 aa1.01□□□□□ -2.25
PRP42YDR235W CNM67P53865 581 aaKnown RBP1.01□□□□□ -2.25
PRP42YDR235W MSS11Q03825 758 aa1.01□□□□□ -2.25
PRP42YDR235W FMP45Q07651 309 aa1.01□□□□□ -2.25
PRP42YDR235W MTF1P14908 341 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W RIT1P23796 513 aa1□□□□□ -2.25
PRP42YDR235W GAC1P28006 793 aa1□□□□□ -2.25
PRP42YDR235W MCM4P30665 933 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W NDC1P32500 655 aa1□□□□□ -2.25
PRP42YDR235W TFC4P33339 1025 aa1□□□□□ -2.25
PRP42YDR235W LHS1P36016 881 aa1□□□□□ -2.25
PRP42YDR235W FPR3P38911 411 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W IDP2P41939 412 aa1□□□□□ -2.25
PRP42YDR235W MAD3P47074 515 aa1□□□□□ -2.25
PRP42YDR235W COG6P53959 839 aa1□□□□□ -2.25
PRP42YDR235W CEG1Q01159 459 aaPredicted RBP1□□□□□ -2.25
PRP42YDR235W MHR1Q06630 226 aa1□□□□□ -2.25
PRP42YDR235W YEH2Q07950 538 aa1□□□□□ -2.25
PRP42YDR235W ARP7Q12406 477 aa1□□□□□ -2.25
PRP42YDR235W FAB1P34756 2278 aa1□□□□□ -2.25
PRP42YDR235W HEM2P05373 342 aa1□□□□□ -2.25
PRP42YDR235W ADE3P07245 946 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W SWI4P25302 1093 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W SPC110P32380 944 aa1□□□□□ -2.25
PRP42YDR235W SPR1P32603 445 aa1□□□□□ -2.25
PRP42YDR235W NTR2P36118 322 aaPredicted RBP1□□□□□ -2.25
PRP42YDR235W GEX2P36173 615 aa1□□□□□ -2.25
PRP42YDR235W AAP1P37898 856 aaKnown RBP1□□□□□ -2.25
PRP42YDR235W MRX1P40050 688 aa1□□□□□ -2.25
PRP42YDR235W YJR120WP47157 116 aa1□□□□□ -2.25
PRP42YDR235W TMA17Q12513 150 aa1□□□□□ -2.25
PRP42YDR235W YCL021W-AQ96VH3 125 aa1□□□□□ -2.25
PRP42YDR235W BIK1P11709 440 aa0.99□□□□□ -2.25
PRP42YDR235W POL3P15436 1097 aa0.99□□□□□ -2.25
PRP42YDR235W TYR1P20049 452 aa0.99□□□□□ -2.25
PRP42YDR235W ARP2P32381 391 aaKnown RBP0.99□□□□□ -2.25
PRP42YDR235W GCD7P32502 381 aaPredicted RBP0.99□□□□□ -2.25
PRP42YDR235W SOF1P33750 489 aaKnown RBP0.99□□□□□ -2.25
PRP42YDR235W RFS1P38234 210 aaKnown RBP0.99□□□□□ -2.25
PRP42YDR235W ARP1P38696 384 aa0.99□□□□□ -2.25
PRP42YDR235W UBP12P39538 1254 aa0.99□□□□□ -2.25
PRP42YDR235W ECM10P39987 644 aa0.99□□□□□ -2.25
PRP42YDR235W YFR020WP43600 232 aa0.99□□□□□ -2.25
PRP42YDR235W SOL4P53315 255 aa0.99□□□□□ -2.25
PRP42YDR235W YLR152CP54072 576 aa0.99□□□□□ -2.25
PRP42YDR235W CRN1Q06440 651 aa0.99□□□□□ -2.25
PRP42YDR235W GRC3Q07845 632 aa0.99□□□□□ -2.25
PRP42YDR235W CDC45Q08032 650 aa0.99□□□□□ -2.25
PRP42YDR235W SWT1Q12104 458 aa0.99□□□□□ -2.25
PRP42YDR235W AYT1Q12226 474 aa0.99□□□□□ -2.25
PRP42YDR235W ARP6Q12509 438 aa0.99□□□□□ -2.25
PRP42YDR235W PMR1P13586 950 aa0.98□□□□□ -2.25
PRP42YDR235W PTR2P32901 601 aa0.98□□□□□ -2.25
PRP42YDR235W MIA40P36046 403 aa0.98□□□□□ -2.25
PRP42YDR235W MTC4P38335 694 aaKnown RBP0.98□□□□□ -2.25
PRP42YDR235W YTA12P40341 825 aa0.98□□□□□ -2.25
PRP42YDR235W AXL1P40851 1208 aa0.98□□□□□ -2.25
PRP42YDR235W ERR3P42222 437 aa0.98□□□□□ -2.25
PRP42YDR235W SWP82P43554 623 aa0.98□□□□□ -2.25
PRP42YDR235W ADE13Q05911 482 aaKnown RBP0.98□□□□□ -2.25
PRP42YDR235W RPL20AP0CX23 172 aaKnown RBP0.97□□□□□ -2.25
PRP42YDR235W RPL20BP0CX24 172 aaPredicted RBP0.97□□□□□ -2.25
PRP42YDR235W SIP2P34164 415 aaKnown RBP0.97□□□□□ -2.25
PRP42YDR235W RPN11P43588 306 aaKnown RBP0.97□□□□□ -2.25
PRP42YDR235W IMA1P53051 589 aa0.97□□□□□ -2.25
PRP42YDR235W PEX14P53112 341 aa0.97□□□□□ -2.25
PRP42YDR235W RSM28Q03430 361 aa0.97□□□□□ -2.25
PRP42YDR235W YMR087WQ04299 284 aa0.97□□□□□ -2.25
PRP42YDR235W EIS1Q05050 843 aaKnown RBP0.97□□□□□ -2.25
PRP42YDR235W IWR1Q07532 353 aaPredicted RBP0.97□□□□□ -2.25
PRP42YDR235W RDR1Q08904 546 aa0.97□□□□□ -2.25
PRP42YDR235W ISY1P21374 235 aaPredicted RBP0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms