RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C SPP2Q02521 185 aa2.11□□□□□ -2.07
BRE1YDL074C RPM2Q02773 1202 aa2.11□□□□□ -2.07
BRE1YDL074C TRS31Q03337 283 aa2.11□□□□□ -2.07
BRE1YDL074C YDR476CQ03362 224 aa2.11□□□□□ -2.07
BRE1YDL074C YMR209CQ03648 457 aa2.11□□□□□ -2.07
BRE1YDL074C YMR160WQ03823 816 aa2.11□□□□□ -2.07
BRE1YDL074C SPC2Q04969 178 aa2.11□□□□□ -2.07
BRE1YDL074C YMR226CQ05016 267 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C ARP9Q05123 467 aa2.11□□□□□ -2.07
BRE1YDL074C ECM22Q05958 814 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C MRI1Q06489 411 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C OSW1Q08692 278 aa2.11□□□□□ -2.07
BRE1YDL074C MCH5Q08777 521 aa2.11□□□□□ -2.07
BRE1YDL074C CHS5Q12114 671 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C GTT2Q12390 233 aa2.11□□□□□ -2.07
BRE1YDL074C BRR1Q99177 341 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C APM4Q99186 491 aa2.11□□□□□ -2.07
BRE1YDL074C AFI1Q99222 893 aa2.11□□□□□ -2.07
BRE1YDL074C SAS5Q99314 248 aa2.11□□□□□ -2.07
BRE1YDL074C RPL24AP04449 155 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C TPK2P06245 380 aa2.11□□□□□ -2.07
BRE1YDL074C MSS18P08593 268 aa2.11□□□□□ -2.07
BRE1YDL074C MAS1P10507 462 aa2.11□□□□□ -2.07
BRE1YDL074C KSS1P14681 368 aa2.11□□□□□ -2.07
BRE1YDL074C SEC63P14906 663 aa2.11□□□□□ -2.07
BRE1YDL074C MTF1P14908 341 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C FAR1P21268 830 aa2.11□□□□□ -2.07
BRE1YDL074C PGS1P25578 521 aa2.11□□□□□ -2.07
BRE1YDL074C RAD27P26793 382 aa2.11□□□□□ -2.07
BRE1YDL074C POT1P27796 417 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
BRE1YDL074C BRF1P29056 596 aa2.11□□□□□ -2.07
BRE1YDL074C HXT3P32466 567 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C SSE2P32590 693 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C UTR2P32623 467 aa2.11□□□□□ -2.07
BRE1YDL074C IMP3P32899 183 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C SIP2P34164 415 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C PTH2P34222 208 aa2.11□□□□□ -2.07
BRE1YDL074C RRN3P36070 627 aa2.11□□□□□ -2.07
BRE1YDL074C KTR4P38131 464 aa2.11□□□□□ -2.07
BRE1YDL074C YHL012WP38709 493 aa2.11□□□□□ -2.07
BRE1YDL074C YHI9P38765 294 aa2.11□□□□□ -2.07
BRE1YDL074C GGA2P38817 585 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C NMD3P38861 518 aaKnown RBP2.11□□□□□ -2.07
BRE1YDL074C TVP23P38962 199 aa2.11□□□□□ -2.07
BRE1YDL074C NUP60P39705 539 aa2.11□□□□□ -2.07
BRE1YDL074C SLX8P40072 274 aa2.11□□□□□ -2.07
BRE1YDL074C ATM1P40416 690 aa2.11□□□□□ -2.07
BRE1YDL074C ASG7P46993 209 aa2.11□□□□□ -2.07
BRE1YDL074C MPS3P47069 682 aa2.11□□□□□ -2.07
BRE1YDL074C NNF1P47149 201 aa2.11□□□□□ -2.07
BRE1YDL074C TOM22P49334 152 aa2.11□□□□□ -2.07
BRE1YDL074C IMA1P53051 589 aa2.11□□□□□ -2.07
BRE1YDL074C BOL2P53082 120 aa2.11□□□□□ -2.07
BRE1YDL074C BUD32P53323 261 aa2.11□□□□□ -2.07
BRE1YDL074C TMA20P89886 181 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C TOF2Q02208 771 aa2.11□□□□□ -2.07
BRE1YDL074C INA17Q02888 182 aa2.11□□□□□ -2.07
BRE1YDL074C SPO20Q04359 397 aa2.11□□□□□ -2.07
BRE1YDL074C DYN3Q04949 312 aa2.11□□□□□ -2.07
BRE1YDL074C SSQ1Q05931 657 aaPredicted RBP2.11□□□□□ -2.07
BRE1YDL074C BLS1Q06071 122 aa2.11□□□□□ -2.07
BRE1YDL074C GMC2Q06201 188 aa2.11□□□□□ -2.07
BRE1YDL074C VTA1Q06263 330 aa2.11□□□□□ -2.07
BRE1YDL074C ATG26Q06321 1198 aa2.11□□□□□ -2.07
BRE1YDL074C HDA3Q06623 655 aa2.11□□□□□ -2.07
BRE1YDL074C YLR413WQ06689 675 aa2.11□□□□□ -2.07
BRE1YDL074C MUM3Q08750 479 aa2.11□□□□□ -2.07
BRE1YDL074C YPR202WQ08993 238 aa2.11□□□□□ -2.07
BRE1YDL074C MDY2Q12285 212 aa2.11□□□□□ -2.07
BRE1YDL074C RPS9AO13516 197 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C YPR089WO13585 888 aa2.1□□□□□ -2.07
BRE1YDL074C SCH9P11792 824 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C DBR1P24309 405 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C DCC1P25559 380 aa2.1□□□□□ -2.07
BRE1YDL074C YME2P32843 850 aa2.1□□□□□ -2.07
BRE1YDL074C LIP5P32875 414 aa2.1□□□□□ -2.07
BRE1YDL074C ASK1P35734 292 aa2.1□□□□□ -2.07
BRE1YDL074C YKR051WP36142 418 aa2.1□□□□□ -2.07
BRE1YDL074C YBR225WP38321 900 aa2.1□□□□□ -2.07
BRE1YDL074C SRP72P38688 640 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C STB5P38699 743 aa2.1□□□□□ -2.07
BRE1YDL074C CYC2P38909 366 aa2.1□□□□□ -2.07
BRE1YDL074C SEO1P39709 593 aa2.1□□□□□ -2.07
BRE1YDL074C THO1P40040 218 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C PDS1P40316 373 aaPredicted RBP2.1□□□□□ -2.07
BRE1YDL074C MAM33P40513 266 aa2.1□□□□□ -2.07
BRE1YDL074C INP51P40559 946 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C CHS6P40955 746 aa2.1□□□□□ -2.07
BRE1YDL074C IME4P41833 600 aa2.1□□□□□ -2.07
BRE1YDL074C YJR142WP47173 342 aa2.1□□□□□ -2.07
BRE1YDL074C RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C NAS6P50086 228 aa2.1□□□□□ -2.07
BRE1YDL074C TAN1P53072 289 aaPredicted RBP2.1□□□□□ -2.07
BRE1YDL074C STR3P53101 465 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C ARI1P53111 347 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C MET13P53128 600 aa2.1□□□□□ -2.07
BRE1YDL074C GET1P53192 235 aa2.1□□□□□ -2.07
BRE1YDL074C YGR016WP53209 190 aa2.1□□□□□ -2.07
BRE1YDL074C SHY1P53266 389 aa2.1□□□□□ -2.07
BRE1YDL074C IBD2P53892 351 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms