RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W LRG1P35688 1017 aa6.32□□□□□ -1.4
SLX5YDL013W MCM7P38132 845 aa6.32□□□□□ -1.4
SLX5YDL013W GND1P38720 489 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W CCC2P38995 1004 aa6.32□□□□□ -1.4
SLX5YDL013W CEM1P39525 442 aa6.32□□□□□ -1.4
SLX5YDL013W HPM1P40481 377 aa6.32□□□□□ -1.4
SLX5YDL013W DOT5P40553 215 aa6.32□□□□□ -1.4
SLX5YDL013W IMD3P50095 523 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W HDA1P53973 706 aa6.32□□□□□ -1.4
SLX5YDL013W SPO77Q06134 477 aa6.32□□□□□ -1.4
SLX5YDL013W YPR022CQ12139 1133 aa6.32□□□□□ -1.4
SLX5YDL013W PSF3Q12146 194 aa6.32□□□□□ -1.4
SLX5YDL013W SNU23Q12368 194 aaPredicted RBP6.32□□□□□ -1.4
SLX5YDL013W ROM2P51862 1356 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W CPA2P03965 1118 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W PMR1P13586 950 aa6.32□□□□□ -1.4
SLX5YDL013W YAK1P14680 807 aa6.32□□□□□ -1.4
SLX5YDL013W RET1P22276 1149 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W YCR101CP25607 182 aa6.32□□□□□ -1.4
SLX5YDL013W SEC1P30619 724 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W PAH1P32567 862 aa6.32□□□□□ -1.4
SLX5YDL013W TPO5P36029 618 aa6.32□□□□□ -1.4
SLX5YDL013W LNP1P38878 278 aa6.32□□□□□ -1.4
SLX5YDL013W KHA1P40309 873 aa6.32□□□□□ -1.4
SLX5YDL013W IRC24P40580 263 aa6.32□□□□□ -1.4
SLX5YDL013W UFE1P41834 346 aa6.32□□□□□ -1.4
SLX5YDL013W ELP2P42935 788 aa6.32□□□□□ -1.4
SLX5YDL013W ALR2P43553 858 aa6.32□□□□□ -1.4
SLX5YDL013W YJR054WP47114 497 aa6.32□□□□□ -1.4
SLX5YDL013W PRO2P54885 456 aaKnown RBP6.32□□□□□ -1.4
SLX5YDL013W MEC3Q02574 474 aa6.32□□□□□ -1.4
SLX5YDL013W RKM2Q03942 479 aa6.32□□□□□ -1.4
SLX5YDL013W YDR444WQ04093 687 aa6.32□□□□□ -1.4
SLX5YDL013W YLR345WQ06137 509 aa6.32□□□□□ -1.4
SLX5YDL013W YLR455WQ06188 304 aa6.32□□□□□ -1.4
SLX5YDL013W THI3Q07471 609 aa6.32□□□□□ -1.4
SLX5YDL013W RBD2Q12270 262 aa6.32□□□□□ -1.4
SLX5YDL013W MDY2Q12285 212 aa6.32□□□□□ -1.4
SLX5YDL013W ARG80P07249 177 aa6.31□□□□□ -1.4
SLX5YDL013W PRP9P19736 530 aaKnown RBP6.31□□□□□ -1.4
SLX5YDL013W DAL81P21657 970 aa6.31□□□□□ -1.4
SLX5YDL013W VPS21P36017 210 aaKnown RBP6.31□□□□□ -1.4
SLX5YDL013W AAP1P37898 856 aaKnown RBP6.31□□□□□ -1.4
SLX5YDL013W PCH2P38126 564 aa6.31□□□□□ -1.4
SLX5YDL013W FES1P38260 290 aa6.31□□□□□ -1.4
SLX5YDL013W GIP2P40036 548 aa6.31□□□□□ -1.4
SLX5YDL013W AXL1P40851 1208 aa6.31□□□□□ -1.4
SLX5YDL013W YFH7P43591 353 aa6.31□□□□□ -1.4
SLX5YDL013W GUS1P46655 708 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SLX5YDL013W YNR068CP53754 272 aa6.31□□□□□ -1.4
SLX5YDL013W YNL034WP53963 612 aa6.31□□□□□ -1.4
SLX5YDL013W YNL018CP53976 612 aa6.31□□□□□ -1.4
SLX5YDL013W EAR1Q03212 550 aa6.31□□□□□ -1.4
SLX5YDL013W MLC2Q06580 163 aa6.31□□□□□ -1.4
SLX5YDL013W YLL007CQ07799 665 aa6.31□□□□□ -1.4
SLX5YDL013W KEL3Q08979 651 aaPredicted RBP6.31□□□□□ -1.4
SLX5YDL013W ATG9Q12142 997 aa6.31□□□□□ -1.4
SLX5YDL013W CBP6P07253 162 aaPredicted RBP6.3□□□□□ -1.4
SLX5YDL013W CHS1P08004 1131 aa6.3□□□□□ -1.4
SLX5YDL013W CDC42P19073 191 aa6.3□□□□□ -1.4
SLX5YDL013W CKI1P20485 582 aa6.3□□□□□ -1.4
SLX5YDL013W VMA16P23968 213 aa6.3□□□□□ -1.4
SLX5YDL013W MET22P32179 357 aa6.3□□□□□ -1.4
SLX5YDL013W DBF20P32328 564 aa6.3□□□□□ -1.4
SLX5YDL013W TDA11P38854 504 aa6.3□□□□□ -1.4
SLX5YDL013W PCL6P40038 420 aa6.3□□□□□ -1.4
SLX5YDL013W PIG2P40187 538 aa6.3□□□□□ -1.4
SLX5YDL013W GCV1P48015 400 aa6.3□□□□□ -1.4
SLX5YDL013W BPL1P48445 690 aaPredicted RBP6.3□□□□□ -1.4
SLX5YDL013W SLX9P53251 210 aaPredicted RBP6.3□□□□□ -1.4
SLX5YDL013W RBG2P53295 368 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W COA4Q05809 96 aa6.3□□□□□ -1.4
SLX5YDL013W DUS3Q06053 668 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W BRE4Q07660 1125 aa6.3□□□□□ -1.4
SLX5YDL013W ESA1Q08649 445 aa6.3□□□□□ -1.4
SLX5YDL013W VPS54Q12071 889 aa6.3□□□□□ -1.4
SLX5YDL013W GCN3P14741 305 aa6.3□□□□□ -1.4
SLX5YDL013W CBP3P21560 335 aa6.3□□□□□ -1.4
SLX5YDL013W GIT1P25346 518 aa6.3□□□□□ -1.4
SLX5YDL013W SED4P25365 1065 aa6.3□□□□□ -1.4
SLX5YDL013W YBR225WP38321 900 aa6.3□□□□□ -1.4
SLX5YDL013W YHR182WP38870 785 aa6.3□□□□□ -1.4
SLX5YDL013W DDI1P40087 428 aa6.3□□□□□ -1.4
SLX5YDL013W SLM1P40485 686 aa6.3□□□□□ -1.4
SLX5YDL013W GVP36P40531 326 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W LSM1P47017 172 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W TMA22P47089 198 aaPredicted RBP6.3□□□□□ -1.4
SLX5YDL013W RTA1P53047 317 aa6.3□□□□□ -1.4
SLX5YDL013W ARI1P53111 347 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W MRM2P53123 320 aa6.3□□□□□ -1.4
SLX5YDL013W YGR111WP53265 400 aa6.3□□□□□ -1.4
SLX5YDL013W RCF2P53721 224 aa6.3□□□□□ -1.4
SLX5YDL013W CNM67P53865 581 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W RPT6Q01939 405 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W YMR010WQ03687 405 aa6.3□□□□□ -1.4
SLX5YDL013W URC2Q04411 772 aa6.3□□□□□ -1.4
SLX5YDL013W RGC1Q06108 1083 aaKnown RBP6.3□□□□□ -1.4
SLX5YDL013W VPS74Q06385 345 aa6.3□□□□□ -1.4
SLX5YDL013W YCL001W-BQ96VH2 84 aa6.3□□□□□ -1.4
SLX5YDL013W PMA1P05030 918 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms