RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C LUC7Q07508 261 aaPredicted RBP4.54□□□□□ -1.68
NPL4YBR170C AIM39Q08223 395 aa4.54□□□□□ -1.68
NPL4YBR170C PGC1Q08959 321 aa4.54□□□□□ -1.68
NPL4YBR170C GAL80P04387 435 aa4.53□□□□□ -1.68
NPL4YBR170C EST1P17214 699 aaPredicted RBP4.53□□□□□ -1.68
NPL4YBR170C VMA16P23968 213 aa4.53□□□□□ -1.68
NPL4YBR170C YCR051WP25631 222 aa4.53□□□□□ -1.68
NPL4YBR170C URA7P28274 579 aaKnown RBP4.53□□□□□ -1.68
NPL4YBR170C LAC1P28496 418 aa4.53□□□□□ -1.68
NPL4YBR170C GDA1P32621 518 aa4.53□□□□□ -1.68
NPL4YBR170C YKL100CP34248 587 aa4.53□□□□□ -1.68
NPL4YBR170C PIH1P38768 344 aa4.53□□□□□ -1.68
NPL4YBR170C LAS21P40367 830 aa4.53□□□□□ -1.68
NPL4YBR170C LCB2P40970 561 aa4.53□□□□□ -1.68
NPL4YBR170C CTR1P49573 406 aa4.53□□□□□ -1.68
NPL4YBR170C VID30P53076 958 aa4.53□□□□□ -1.68
NPL4YBR170C OGG1P53397 376 aaPredicted RBP4.53□□□□□ -1.68
NPL4YBR170C ADE16P54113 591 aaKnown RBP4.53□□□□□ -1.68
NPL4YBR170C YDR179W-AQ03983 463 aa4.53□□□□□ -1.68
NPL4YBR170C YML053CQ04978 212 aa4.53□□□□□ -1.68
NPL4YBR170C RQC1Q05468 723 aaKnown RBP4.53□□□□□ -1.68
NPL4YBR170C PDH1Q12428 516 aaKnown RBP4.53□□□□□ -1.68
NPL4YBR170C AVL9Q12500 764 aa4.53□□□□□ -1.68
NPL4YBR170C RNR3P21672 869 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C SYN8P31377 255 aa4.52□□□□□ -1.69
NPL4YBR170C APE3P37302 537 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C SUL1P38359 859 aa4.52□□□□□ -1.69
NPL4YBR170C SEC31P38968 1273 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C AFG3P39925 761 aa4.52□□□□□ -1.69
NPL4YBR170C BUR6P40096 142 aa4.52□□□□□ -1.69
NPL4YBR170C ARG2P40360 574 aa4.52□□□□□ -1.69
NPL4YBR170C PET130P47065 347 aa4.52□□□□□ -1.69
NPL4YBR170C RPS7BP48164 190 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C SMX3P54999 86 aaPredicted RBP4.52□□□□□ -1.69
NPL4YBR170C OAZ1Q02803 292 aa4.52□□□□□ -1.69
NPL4YBR170C RSM28Q03430 361 aa4.52□□□□□ -1.69
NPL4YBR170C YDR239CQ03780 787 aa4.52□□□□□ -1.69
NPL4YBR170C ARX1Q03862 593 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C FMP40Q08968 688 aaPredicted RBP4.52□□□□□ -1.69
NPL4YBR170C WBP1P33767 430 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C PMT1P33775 817 aa4.52□□□□□ -1.69
NPL4YBR170C DEF1P35732 738 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C CMC1P36064 111 aa4.52□□□□□ -1.69
NPL4YBR170C TCD2P36101 447 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C GMH1P36125 273 aa4.52□□□□□ -1.69
NPL4YBR170C OTU2P38747 307 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C GDI1P39958 451 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C PHM8P40025 321 aa4.52□□□□□ -1.69
NPL4YBR170C YIL166CP40445 542 aa4.52□□□□□ -1.69
NPL4YBR170C NDC80P40460 691 aa4.52□□□□□ -1.69
NPL4YBR170C SEC28P40509 296 aaKnown RBP4.52□□□□□ -1.69
NPL4YBR170C ZIM17P42844 174 aa4.52□□□□□ -1.69
NPL4YBR170C COG2P53271 262 aa4.52□□□□□ -1.69
NPL4YBR170C RPA49Q01080 415 aaPredicted RBP4.52□□□□□ -1.69
NPL4YBR170C YPL191CQ08930 360 aa4.52□□□□□ -1.69
NPL4YBR170C WHI2P12611 486 aa4.51□□□□□ -1.69
NPL4YBR170C DAL5P15365 543 aa4.51□□□□□ -1.69
NPL4YBR170C REC107P21651 314 aa4.51□□□□□ -1.69
NPL4YBR170C MRE11P32829 692 aa4.51□□□□□ -1.69
NPL4YBR170C VBA2P38358 474 aaKnown RBP4.51□□□□□ -1.69
NPL4YBR170C DIA4P38705 446 aaPredicted RBP4.51□□□□□ -1.69
NPL4YBR170C BUD27P43573 796 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
NPL4YBR170C RPN11P43588 306 aaKnown RBP4.51□□□□□ -1.69
NPL4YBR170C IRC8P47046 822 aa4.51□□□□□ -1.69
NPL4YBR170C TWF1P53250 332 aa4.51□□□□□ -1.69
NPL4YBR170C COQ6P53318 479 aa4.51□□□□□ -1.69
NPL4YBR170C BOP3P53958 396 aa4.51□□□□□ -1.69
NPL4YBR170C MAK10Q02197 733 aa4.51□□□□□ -1.69
NPL4YBR170C PEX25Q02969 394 aa4.51□□□□□ -1.69
NPL4YBR170C GYL1Q04322 720 aa4.51□□□□□ -1.69
NPL4YBR170C ROY1Q04847 553 aa4.51□□□□□ -1.69
NPL4YBR170C FMP45Q07651 309 aa4.51□□□□□ -1.69
NPL4YBR170C SMF3Q12078 473 aaPredicted RBP4.51□□□□□ -1.69
NPL4YBR170C RLM1Q12224 676 aa4.51□□□□□ -1.69
NPL4YBR170C ZPS1Q12512 249 aa4.51□□□□□ -1.69
NPL4YBR170C MF(ALPHA)1P01149 165 aa4.5□□□□□ -1.69
NPL4YBR170C HXK2P04807 486 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C MDH1P17505 334 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
NPL4YBR170C RRP43P25359 394 aaPredicted RBP4.5□□□□□ -1.69
NPL4YBR170C RRP7P25368 297 aaPredicted RBP4.5□□□□□ -1.69
NPL4YBR170C PAP1P29468 568 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C SSE2P32590 693 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C TIF3P34167 436 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C SEF1P34228 1148 aa4.5□□□□□ -1.69
NPL4YBR170C CBR1P38626 284 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C PCL5P38794 229 aa4.5□□□□□ -1.69
NPL4YBR170C SAP1P39955 897 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C TCB2P48231 1178 aa4.5□□□□□ -1.69
NPL4YBR170C IMD4P50094 524 aaKnown RBP4.5□□□□□ -1.69
NPL4YBR170C RAD33Q04231 177 aa4.5□□□□□ -1.69
NPL4YBR170C ARG7Q04728 441 aa4.5□□□□□ -1.69
NPL4YBR170C YOL073CQ08232 322 aa4.5□□□□□ -1.69
NPL4YBR170C PCL8Q08966 492 aa4.5□□□□□ -1.69
NPL4YBR170C AFI1Q99222 893 aa4.5□□□□□ -1.69
NPL4YBR170C CYB2P00175 591 aa4.49□□□□□ -1.69
NPL4YBR170C PDA1P16387 420 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C KGD1P20967 1014 aaKnown RBP4.49□□□□□ -1.69
NPL4YBR170C ADH7P25377 361 aa4.49□□□□□ -1.69
NPL4YBR170C ERV1P27882 189 aa4.49□□□□□ -1.69
NPL4YBR170C PUP2P32379 260 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms