RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	MRM2	P53123	320 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	NHP10	Q03435	203 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	PPN1	Q04119	674 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	ENT4	Q07872	247 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	UBX3	Q12229	455 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	MDY2	Q12285	212 aa		10.39	□□□□□ -0.75
GDH3	YAL062W	RHO2	P06781	192 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	MPH2	P0CD99	609 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	RNA1	P11745	407 aa	Known RBP	10.38	□□□□□ -0.75
GDH3	YAL062W	EXO70	P19658	623 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	RPB4	P20433	221 aa	Predicted RBP	10.38	□□□□□ -0.75
GDH3	YAL062W	NPP1	P25353	742 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	MRPL9	P31334	269 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	STE5	P32917	917 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	YBR259W	P38338	688 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	MGS1	P40151	587 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	RSM7	P47150	247 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	YPL109C	Q02981	657 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	YMR178W	Q03219	274 aa	Known RBP	10.38	□□□□□ -0.75
GDH3	YAL062W	SPO20	Q04359	397 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	BLS1	Q06071	122 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	SEC10	Q06245	871 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	CRN1	Q06440	651 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	TGL5	Q12043	749 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	STB3	Q12427	513 aa		10.38	□□□□□ -0.75
GDH3	YAL062W	RPS9A	O13516	197 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	YPR089W	O13585	888 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	MSF1	P08425	469 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	APA1	P16550	321 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	YCR090C	P25654	182 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	BRF1	P29056	596 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	MVD1	P32377	396 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	PTM1	P32857	523 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	SWH1	P35845	1188 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	VRP1	P37370	817 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	LRP1	P38801	184 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	SET2	P46995	733 aa	Known RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	TMA22	P47089	198 aa	Predicted RBP	10.37	□□□□□ -0.75
GDH3	YAL062W	ILM1	P47155	203 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	ATH1	P48016	1211 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	EMC4	P53073	190 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	VAC7	P53950	1165 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	FMN1	Q03778	218 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	YPL247C	Q12523	523 aa		10.37	□□□□□ -0.75
GDH3	YAL062W	SEC53	P07283	254 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	SBP1	P10080	294 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	SEC63	P14906	663 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	UBA1	P22515	1024 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	MRM1	P25270	412 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	PUP3	P25451	205 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	SPS19	P32573	292 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	THI80	P35202	319 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	LRG1	P35688	1017 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	ERP5	P38819	212 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	RIX1	P38883	763 aa	Predicted RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	STN1	P38960	494 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	SEC31	P38968	1273 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	UBP6	P43593	499 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	RNR4	P49723	345 aa	Known RBP	10.36	□□□□□ -0.75
GDH3	YAL062W	CIA1	Q05583	330 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	HDA3	Q06623	655 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	NSE1	Q07913	336 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	ICT1	Q12385	394 aa		10.36	□□□□□ -0.75
GDH3	YAL062W	HEM2	P05373	342 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	SPS1	P08458	490 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	TOA1	P32773	286 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	DCW1	P36091	449 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	RFC3	P38629	340 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	BZZ1	P38822	633 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	YIR007W	P40566	764 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	AIF1	P52923	378 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	SLM2	P53955	656 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	ARP4	P80428	489 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	IRC10	Q08118	586 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	ALR1	Q08269	859 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	BUD7	Q08754	746 aa		10.35	□□□□□ -0.75
GDH3	YAL062W	RAD3	P06839	778 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	PRP18	P33411	251 aa	Predicted RBP	10.34	□□□□□ -0.75
GDH3	YAL062W	CLD1	P53264	445 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	FRE4	P53746	719 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	UBP2	Q01476	1272 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	RMI1	Q02685	241 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	RCO1	Q04779	684 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	YOL019W	Q08157	551 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	YOR012W	Q12351	137 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	GTT2	Q12390	233 aa		10.34	□□□□□ -0.75
GDH3	YAL062W	RRP36	Q12481	300 aa	Predicted RBP	10.34	□□□□□ -0.75
GDH3	YAL062W	SEC15	P22224	910 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	RIM101	P33400	625 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	YKR023W	P36119	530 aa	Known RBP	10.33	□□□□□ -0.76
GDH3	YAL062W	EFM1	P38732	585 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	10.33	□□□□□ -0.76	not detected
GDH3	YAL062W	RIO2	P40160	425 aa	Known RBP	10.33	□□□□□ -0.76
GDH3	YAL062W	COA1	P40452	197 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	PRM2	P40534	656 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	IRR1	P40541	1150 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	LSM3	P57743	89 aa	Known RBP	10.33	□□□□□ -0.76
GDH3	YAL062W	PEX13	P80667	386 aa		10.33	□□□□□ -0.76
GDH3	YAL062W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	10.33	□□□□□ -0.76	not detected
GDH3	YAL062W	OSH6	Q02201	448 aa		10.33	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 97.4 ms