RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 SUGT1Q9Y2Z0 365 aa20.4■□□□□ 0.86
PHGDH-226ENST00000641756 KLRF2D3W0D1 207 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 TPM4P67936 248 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 USP17L2Q6R6M4 530 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 SH3GLB2Q9NR46 395 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 KCNQ5Q9NR82 932 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 USP40Q9NVE5 1235 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 IFNKQ9P0W0 207 aa20.39■□□□□ 0.86
PHGDH-226ENST00000641756 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.86
PHGDH-226ENST00000641756 IKBKBO14920 756 aa20.39■□□□□ 0.85
PHGDH-226ENST00000641756 XPO4Q9C0E2 1151 aaKnown RBP20.39■□□□□ 0.85
PHGDH-226ENST00000641756 HSD3B7Q9H2F3 369 aa20.39■□□□□ 0.85
PHGDH-226ENST00000641756 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 PARP1P09874 1014 aaKnown RBP20.38■□□□□ 0.85
PHGDH-226ENST00000641756 SMARCE1Q969G3 411 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 TOP1P11387 765 aaKnown RBP20.38■□□□□ 0.85
PHGDH-226ENST00000641756 ATP1A3P13637 1013 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 RXRBP28702 533 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 TRAPPC10P48553 1259 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 MYL5Q02045 173 aa20.38■□□□□ 0.85
PHGDH-226ENST00000641756 STXBP3O00186 592 aa20.37■□□□□ 0.85
PHGDH-226ENST00000641756 BARHL2Q9NY43 387 aa20.37■□□□□ 0.85
PHGDH-226ENST00000641756 AFMP43652 599 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 SARSP49591 514 aaKnown RBP20.36■□□□□ 0.85
PHGDH-226ENST00000641756 IL17AQ16552 155 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 KANK3Q6NY19 840 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 HOMER1Q86YM7 354 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 LRRC8AQ8IWT6 810 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 LZTS2Q9BRK4 669 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 VAT1LQ9HCJ6 419 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 PCDHA6Q9UN73 950 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 PCDHA8Q9Y5H6 950 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 USP17L5A8MUK1 530 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 M0R2N6 131 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 AKR1B1P15121 316 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 EIF6P56537 245 aaKnown RBP20.36■□□□□ 0.85
PHGDH-226ENST00000641756 GABPAQ06546 454 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 NT5DC1Q5TFE4 455 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 CDC42EP5Q6NZY7 148 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 CLEC10AQ8IUN9 316 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 CCDC148Q8NFR7 591 aa20.36■□□□□ 0.85
PHGDH-226ENST00000641756 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-226ENST00000641756 CCDC194A0A1B0GVG4 234 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 CASP1P29466 404 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 FANCCQ00597 558 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 SPZ1Q9BXG8 430 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 CHRNA5P30532 468 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 MORC3Q14149 939 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 APOBEC3HQ6NTF7 200 aaKnown RBP20.35■□□□□ 0.85
PHGDH-226ENST00000641756 LRRC47Q8N1G4 583 aaKnown RBP20.35■□□□□ 0.85
PHGDH-226ENST00000641756 TEKT1Q969V4 418 aa20.35■□□□□ 0.85
PHGDH-226ENST00000641756 TNS1Q9HBL0 1735 aaKnown RBP20.34■□□□□ 0.85
PHGDH-226ENST00000641756 FRMPD2Q68DX3 1309 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-226ENST00000641756 H0YIN7 160 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 SLFN14P0C7P3 912 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 SLURP2P0DP57 97 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 TMC6Q7Z403 805 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 PAGE5Q96GU1 130 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
PHGDH-226ENST00000641756 NOVP48745 357 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 NAPAP54920 295 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 NFIAQ12857 509 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 INF2Q27J81 1249 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 HHIPL2Q6UWX4 724 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 KIAA0825Q8IV33 1275 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 DAGLBQ8NCG7 672 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 OSBPL5Q9H0X9 879 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-226ENST00000641756 FANCLQ9NW38 375 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 MTMR4Q9NYA4 1195 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 SERPINB13Q9UIV8 391 aa20.33■□□□□ 0.85
PHGDH-226ENST00000641756 CRKP46108 304 aa20.33■□□□□ 0.84
PHGDH-226ENST00000641756 C4orf32Q8N8J7 132 aa20.33■□□□□ 0.84
PHGDH-226ENST00000641756 RRP36Q96EU6 259 aaKnown RBP20.33■□□□□ 0.84
PHGDH-226ENST00000641756 PIGSQ96S52 555 aa20.33■□□□□ 0.84
PHGDH-226ENST00000641756 MYH8P13535 1937 aa20.33■□□□□ 0.84
PHGDH-226ENST00000641756 SLX4Q8IY92 1834 aa20.33■□□□□ 0.84
PHGDH-226ENST00000641756 PLIN4Q96Q06 1357 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.843e-7■■■□□ 15
PHGDH-226ENST00000641756 HSP90AA4PQ58FG1 418 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 SH3RF1Q7Z6J0 888 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 SPATA20Q8TB22 786 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 STAMQ92783 540 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 DPF2Q92785 391 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 TPM2P07951 284 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 PDHBP11177 359 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 CACNB3P54284 484 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 ZFPM1Q8IX07 1006 aa20.32■□□□□ 0.84
PHGDH-226ENST00000641756 TRMT44Q8IYL2 757 aaKnown RBP20.32■□□□□ 0.84
PHGDH-226ENST00000641756 ECE2O60344 883 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 SERPINC1P01008 464 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 TERF1P54274 439 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 GALNT17Q6IS24 598 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 STYK1Q6J9G0 422 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 TRIML1Q8N9V2 468 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 MLKLQ8NB16 471 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
PHGDH-226ENST00000641756 SEC63Q9UGP8 760 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms