RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNF543Q08ER8 600 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 MAP3K11Q16584 847 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
PHGDH-215ENST00000641371 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
PHGDH-215ENST00000641371 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■■■■□ 19.6
PHGDH-215ENST00000641371 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 VPS54Q9P1Q0 977 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 PCDHA4Q9UN74 947 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 H7C1D1 291 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 WNT10BO00744 389 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 CCDC192P0DO97 292 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 APOBEC3FQ8IUX4 373 aaKnown RBP11.15□□□□□ -0.62
PHGDH-215ENST00000641371 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
PHGDH-215ENST00000641371 ELOA2Q8IYF1 753 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-215ENST00000641371 BLIDQ8IZY5 108 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 PGBD1Q96JS3 809 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 TIGD1Q96MW7 591 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 TNMDQ9H2S6 317 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 CLSTN2Q9H4D0 955 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 HOOK1Q9UJC3 728 aaKnown RBP11.15□□□□□ -0.62
PHGDH-215ENST00000641371 KCNJ14Q9UNX9 436 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 PPP2R3BQ9Y5P8 575 aa11.15□□□□□ -0.62
PHGDH-215ENST00000641371 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 SYCE3A1L190 88 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 PSDA5PKW4 1024 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 LAD1O00515 517 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 DTNBO60941 627 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 ASNSP08243 561 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 CACNB3P54284 484 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 CEBPZQ03701 1054 aaKnown RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 RBM43Q6ZSC3 357 aaKnown RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 KRT25Q7Z3Z0 450 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 FSIP1Q8NA03 581 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 ZMYND12Q9H0C1 365 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 DNAJC18Q9H819 358 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 FAM13BQ9NYF5 915 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 PCDHA7Q9UN72 937 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 CLIC4Q9Y696 253 aa11.14□□□□□ -0.63
PHGDH-215ENST00000641371 BAZ2BQ9UIF8 2168 aaKnown RBP11.14□□□□□ -0.63
PHGDH-215ENST00000641371 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 SLC1A4P43007 532 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 NAPAP54920 295 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 PTPAQ15257 358 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 ARL6IP4Q66PJ3 421 aaKnown RBP11.13□□□□□ -0.63
PHGDH-215ENST00000641371 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 HEATR3Q7Z4Q2 680 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 GPC2Q8N158 579 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
PHGDH-215ENST00000641371 TNFRSF25Q93038 417 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
PHGDH-215ENST00000641371 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 PNMA2Q9UL42 364 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
PHGDH-215ENST00000641371 CNTNAP1P78357 1384 aa11.13□□□□□ -0.63
PHGDH-215ENST00000641371 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 USP17L5A8MUK1 530 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 STXBP3O00186 592 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 CYTH3O43739 400 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 PLA2G6O60733 806 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
PHGDH-215ENST00000641371 LIG1P18858 919 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 PTPREP23469 700 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 GMPSP49915 693 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-215ENST00000641371 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 TTC38Q5R3I4 469 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 WWC2Q6AWC2 1192 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 SASS6Q6UVJ0 657 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 MTMR8Q96EF0 704 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
PHGDH-215ENST00000641371 TMX2Q9Y320 296 aa11.12□□□□□ -0.63
PHGDH-215ENST00000641371 PCDHAC2Q9Y5I4 1007 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms