RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 C16orf45Q96MC5 204 aaPredicted RBP24.51■■□□□ 1.51
CLN6-224ENST00000638076 AFMP43652 599 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 WWC2Q6AWC2 1192 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 RASGRP4Q8TDF6 673 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 DACH1Q9UI36 760 aa24.51■■□□□ 1.51
CLN6-224ENST00000638076 ANKRD31Q8N7Z5 1873 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 RASGRP2Q7LDG7 609 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 DPF2Q92785 391 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 PAGE5Q96GU1 130 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 F8W031 263 aaPredicted RBP24.5■■□□□ 1.51
CLN6-224ENST00000638076 DYNC1I1O14576 645 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 MYO1BO43795 1136 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 HEATR3Q7Z4Q2 680 aa24.5■■□□□ 1.51
CLN6-224ENST00000638076 ZC3H12CQ9C0D7 883 aaKnown RBP24.5■■□□□ 1.51
CLN6-224ENST00000638076 KLRF2D3W0D1 207 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 CBFA2T2O43439 604 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 FMR1Q06787 632 aaKnown RBP eCLIP24.49■■□□□ 1.51
CLN6-224ENST00000638076 TPD52L1Q16890 204 aaPredicted RBP24.49■■□□□ 1.51
CLN6-224ENST00000638076 SH3RF1Q7Z6J0 888 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 LZTS2Q9BRK4 669 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 M0R2N6 131 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 NPR1P16066 1061 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 CFAP100Q494V2 611 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 ARMCX5Q6P1M9 558 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 CCDC148Q8NFR7 591 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 CEP95Q96GE4 821 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 BARHL2Q9NY43 387 aa24.49■■□□□ 1.51
CLN6-224ENST00000638076 PICALMQ13492 652 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 IL17AQ16552 155 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 CCDC150Q8NCX0 1101 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 AKT1S1Q96B36 256 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 CPVLQ9H3G5 476 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 MYH1P12882 1939 aa24.48■■□□□ 1.51
CLN6-224ENST00000638076 STXBP3O00186 592 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 CERS5Q8N5B7 392 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 CCDC194A0A1B0GVG4 234 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 PARP1P09874 1014 aaKnown RBP24.47■■□□□ 1.51
CLN6-224ENST00000638076 CASP1P29466 404 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 ENOX1Q8TC92 643 aaKnown RBP24.47■■□□□ 1.51
CLN6-224ENST00000638076 UBE2Q2Q8WVN8 375 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 PCDHA6Q9UN73 950 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 SUGT1Q9Y2Z0 365 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 NFE2L3Q9Y4A8 694 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 PCDHA8Q9Y5H6 950 aa24.47■■□□□ 1.51
CLN6-224ENST00000638076 USP27XA6NNY8 438 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 SFPQP23246 707 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLN6-224ENST00000638076 HSP90AA4PQ58FG1 418 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 USP17L2Q6R6M4 530 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 TRMT44Q8IYL2 757 aaKnown RBP24.46■■□□□ 1.51
CLN6-224ENST00000638076 DAGLBQ8NCG7 672 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 SPZ1Q9BXG8 430 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 TNNT1P13805 278 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 ALDH1B1P30837 517 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 DOK7Q18PE1 504 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 ARL6IP4Q66PJ3 421 aaKnown RBP24.46■■□□□ 1.51
CLN6-224ENST00000638076 GALNT17Q6IS24 598 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 DPP8Q6V1X1 898 aaPredicted RBP24.46■■□□□ 1.51
CLN6-224ENST00000638076 C4orf32Q8N8J7 132 aa24.46■■□□□ 1.51
CLN6-224ENST00000638076 PLSCR1O15162 318 aa24.45■■□□□ 1.51
CLN6-224ENST00000638076 APBA3O96018 575 aa24.45■■□□□ 1.51
CLN6-224ENST00000638076 TOP1P11387 765 aaKnown RBP24.45■■□□□ 1.51
CLN6-224ENST00000638076 DPYDQ12882 1025 aa24.45■■□□□ 1.51
CLN6-224ENST00000638076 MXD3Q9BW11 206 aa24.45■■□□□ 1.51
CLN6-224ENST00000638076 TTF2Q9UNY4 1162 aaKnown RBP24.45■■□□□ 1.51
CLN6-224ENST00000638076 E2F4Q16254 413 aa24.45■■□□□ 1.5
CLN6-224ENST00000638076 IQUBQ8NA54 791 aa24.45■■□□□ 1.5
CLN6-224ENST00000638076 MMP10P09238 476 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 GTF2F1P35269 517 aaKnown RBP eCLIP24.44■■□□□ 1.51e-6■■■■□ 26
CLN6-224ENST00000638076 PDE6BP35913 854 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 DHX8Q14562 1220 aaKnown RBP24.44■■□□□ 1.5
CLN6-224ENST00000638076 MED15Q96RN5 788 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 NRXN2Q9P2S2 1712 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 RBM10P98175 930 aaKnown RBP24.44■■□□□ 1.5
CLN6-224ENST00000638076 STAMQ92783 540 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 GSDMAQ96QA5 445 aa24.44■■□□□ 1.5
CLN6-224ENST00000638076 DDX4Q9NQI0 724 aaKnown RBP24.44■■□□□ 1.5
CLN6-224ENST00000638076 ZNF18P17022 549 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 ERCC5P28715 1186 aaPredicted RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 NOVP48745 357 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 INF2Q27J81 1249 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 VSTM4Q8IW00 320 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 FOCADQ5VW36 1801 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 TMEM232C9JQI7 657 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 RIOK3O14730 519 aaKnown RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 CDK11BP21127 795 aaKnown RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 LONP1P36776 959 aaKnown RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 HOMER1Q86YM7 354 aa24.43■■□□□ 1.5
CLN6-224ENST00000638076 PYM1Q9BRP8 204 aaKnown RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 TRMT1Q9NXH9 659 aaKnown RBP24.43■■□□□ 1.5
CLN6-224ENST00000638076 SCNN1DP51172 638 aa24.42■■□□□ 1.5
CLN6-224ENST00000638076 NAPAP54920 295 aa24.42■■□□□ 1.5
CLN6-224ENST00000638076 GABPAQ06546 454 aa24.42■■□□□ 1.5
CLN6-224ENST00000638076 CCAR2Q8N163 923 aaKnown RBP24.42■■□□□ 1.5
CLN6-224ENST00000638076 ZMYND12Q9H0C1 365 aa24.42■■□□□ 1.5
CLN6-224ENST00000638076 INTS13Q9NVM9 706 aa24.42■■□□□ 1.5
CLN6-224ENST00000638076 PTPN21Q16825 1174 aa24.41■■□□□ 1.5
CLN6-224ENST00000638076 PDXDC2PQ6P474 469 aa24.41■■□□□ 1.5
CLN6-224ENST00000638076 FAM177A1Q8N128 213 aaPredicted RBP24.41■■□□□ 1.5
CLN6-224ENST00000638076 RRP36Q96EU6 259 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms