RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 AHDC1Q5TGY3 1603 aaPredicted RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 SRCAPQ6ZRS2 3230 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 ORC4O43929 436 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 HOXA7P31268 230 aaPredicted RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 MATR3P43243 847 aaKnown RBP eCLIP6.24□□□□□ -1.413e-8■■□□□ 11.7
CHD2-227ENST00000637572 DYNLL1P63167 89 aaKnown RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 SBK1Q52WX2 424 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 RCSD1Q6JBY9 416 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 PADI6Q6TGC4 694 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 LRSAM1Q6UWE0 723 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 APBB1IPQ7Z5R6 666 aaPredicted RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 NLRX1Q86UT6 975 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 COL23A1Q86Y22 540 aaPredicted RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 FMNL3Q8IVF7 1028 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 TDRD7Q8NHU6 1098 aaKnown RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 AMNQ9BXJ7 453 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 DEF6Q9H4E7 631 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 KIF2AO00139 706 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 MYCP01106 439 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 CCNA1P78396 465 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 LETM2Q2VYF4 491 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 GNPTABQ3T906 1256 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 FBXO11Q86XK2 927 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 BLIDQ8IZY5 108 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NT5C3AQ9H0P0 336 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 PDCL3Q9H2J4 239 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 FOXP1Q9H334 677 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 TPCN1Q9ULQ1 816 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 ENTPD3O75355 529 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 PRDX5P30044 214 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 HOXA10P31260 410 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 MCM7P33993 719 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 DIXDC1Q155Q3 683 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 AGBL3Q8NEM8 1001 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 FBXO18Q8NFZ0 1043 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 FAM200AQ8TCP9 573 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 DCAF4Q8WV16 495 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 PDGFDQ9GZP0 370 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 DACT1Q9NYF0 836 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 BOLA1Q9Y3E2 137 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SHPRHQ149N8 1683 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SMCO2A6NFE2 343 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 FMNL1O95466 1100 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 CCDC172P0C7W6 258 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 GCFC2P16383 781 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 CDK8P49336 464 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 CASP7P55210 303 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NCBP1Q09161 790 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 PIK3AP1Q6ZUJ8 805 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SV2BQ7L1I2 683 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 METTL3Q86U44 580 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 CKAP2LQ8IYA6 745 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SLFN12Q8IYM2 578 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 GOLGA6L1Q8N7Z2 621 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NSUN4Q96CB9 384 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 DCP1AQ9NPI6 582 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 PARP4Q9UKK3 1724 aaKnown RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 KDM3AQ9Y4C1 1321 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 MRC1P22897 1456 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 A0A0U1RQG5 324 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 GCOM1H8Y6P7 765 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 POLR2MP0CAP2 368 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 NDUFV2P19404 249 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SFPQP23246 707 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD2-227ENST00000637572 MARCKSP29966 332 aaPredicted RBP6.23□□□□□ -1.41
CHD2-227ENST00000637572 AOC3Q16853 763 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 CCDC65Q8IXS2 484 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 PBXIP1Q96AQ6 731 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 ZNF341Q9BYN7 854 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 PSTPIP2Q9H939 334 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SH3GLB2Q9NR46 395 aa6.23□□□□□ -1.41
CHD2-227ENST00000637572 SLIT2O94813 1529 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 PRPF3O43395 683 aaKnown RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 SRGNP10124 158 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 BMP3P12645 472 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 ASIC1P78348 528 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 HS2ST1Q7LGA3 356 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 SYCP3Q8IZU3 236 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 CAMKK2Q96RR4 588 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 LMO7Q8WWI1 1683 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 ROBO1Q9Y6N7 1651 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 STK36Q9NRP7 1315 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 PPP4CP60510 307 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 KLHL10Q6JEL2 608 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 NLGN2Q8NFZ4 835 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 SMCR8Q8TEV9 937 aaPredicted RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 PHKBQ93100 1093 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 MAGEF1Q9HAY2 307 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 ZSWIM5Q9P217 1185 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 MYO6Q9UM54 1294 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 CD2APQ9Y5K6 639 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 MOXD2PA6NHM9 499 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 PRKAB2O43741 272 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms