RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PAWRQ96IZ0 340 aaKnown RBP22.55■■□□□ 1.2
CLN6-221ENST00000637494 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.55■■□□□ 1.2
CLN6-221ENST00000637494 CTDP1Q9Y5B0 961 aaPredicted RBP22.55■■□□□ 1.2
CLN6-221ENST00000637494 A0A0G2JMZ2 1700 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 EVI5O60447 810 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 TTLL1O95922 423 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 ADORA2AP29274 412 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 COPB2P35606 906 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 SMC5Q8IY18 1101 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 NBPF3Q9H094 633 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 OGDHLQ9ULD0 1010 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 PPP1R9AQ9ULJ8 1098 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
CLN6-221ENST00000637494 F5H6K3 240 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 SLC34A2O95436 690 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 FCER1AP12319 257 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 KLRC3Q07444 240 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 CCDC129Q6ZRS4 1044 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 ABRAQ8N0Z2 381 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 RILPL2Q969X0 211 aa22.53■■□□□ 1.2
CLN6-221ENST00000637494 GREB1LQ9C091 1923 aaPredicted RBP22.53■■□□□ 1.2
CLN6-221ENST00000637494 CNGA1P29973 690 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 CCND3P30281 292 aaPredicted RBP22.52■■□□□ 1.2
CLN6-221ENST00000637494 TMEM132BQ14DG7 1078 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 NEDD1Q8NHV4 660 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 NPLOC4Q8TAT6 608 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 CEP95Q96GE4 821 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 SLF1Q9BQI6 1058 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 FBXO28Q9NVF7 368 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 MTMR4Q9NYA4 1195 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 ADAMTS5Q9UNA0 930 aa22.52■■□□□ 1.2
CLN6-221ENST00000637494 RLFQ13129 1914 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 MKI67P46013 3256 aaKnown RBP22.51■■□□□ 1.19
CLN6-221ENST00000637494 IGKV6D-41A0A0C4DH26 115 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 VWA5AO00534 786 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 MSCO60682 206 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 STAT3P40763 770 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 TFAP4Q01664 338 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 MCMDC2Q4G0Z9 681 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 HABP4Q5JVS0 413 aaKnown RBP22.51■■□□□ 1.19
CLN6-221ENST00000637494 RIOX2Q8IUF8 465 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 MKL1Q969V6 931 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 C11orf49Q9H6J7 331 aa22.51■■□□□ 1.19
CLN6-221ENST00000637494 ZNF236Q9UL36 1845 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 TSPY2A6NKD2 308 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 NDUFB10O96000 172 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 MFAP1P55081 439 aaKnown RBP22.5■■□□□ 1.19
CLN6-221ENST00000637494 KCTD2Q14681 263 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 OLFML2BQ68BL8 750 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 PRPF38AQ8NAV1 312 aaKnown RBP22.5■■□□□ 1.19
CLN6-221ENST00000637494 DIS3LQ8TF46 1054 aaKnown RBP22.5■■□□□ 1.19
CLN6-221ENST00000637494 FLRT1Q9NZU1 646 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 ISY1Q9ULR0 285 aaKnown RBP22.5■■□□□ 1.19
CLN6-221ENST00000637494 PLIN4Q96Q06 1357 aa22.5■■□□□ 1.19
CLN6-221ENST00000637494 ZBED4O75132 1171 aa22.49■■□□□ 1.19
CLN6-221ENST00000637494 NUCB1Q02818 461 aa22.49■■□□□ 1.19
CLN6-221ENST00000637494 FAM47AQ5JRC9 791 aa22.49■■□□□ 1.19
CLN6-221ENST00000637494 MMP19Q99542 508 aa22.49■■□□□ 1.19
CLN6-221ENST00000637494 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
CLN6-221ENST00000637494 SUPT16HQ9Y5B9 1047 aaKnown RBP22.49■■□□□ 1.19
CLN6-221ENST00000637494 IGHDP01880 384 aa22.48■■□□□ 1.19
CLN6-221ENST00000637494 CYP2C19P33261 490 aa22.48■■□□□ 1.19
CLN6-221ENST00000637494 CTDSPL2Q05D32 466 aa22.48■■□□□ 1.19
CLN6-221ENST00000637494 GMCL1P1Q8NEA9 526 aa22.48■■□□□ 1.19
CLN6-221ENST00000637494 FEM1BQ9UK73 627 aa22.48■■□□□ 1.19
CLN6-221ENST00000637494 PARP14Q460N5 1801 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 ALX1Q15699 326 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 SLFN13Q68D06 897 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 LRRC47Q8N1G4 583 aaKnown RBP22.47■■□□□ 1.19
CLN6-221ENST00000637494 FAM227BQ96M60 508 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 TEX13BQ9BXU2 312 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 TOMM22Q9NS69 142 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 DDX20Q9UHI6 824 aaKnown RBP22.47■■□□□ 1.19
CLN6-221ENST00000637494 ANAPC4Q9UJX5 808 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 COLQQ9Y215 455 aaPredicted RBP22.47■■□□□ 1.19
CLN6-221ENST00000637494 MYH4Q9Y623 1939 aa22.47■■□□□ 1.19
CLN6-221ENST00000637494 A0A0D9SFI3 127 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 RANBP6O60518 1105 aaKnown RBP22.46■■□□□ 1.19
CLN6-221ENST00000637494 BMP3P12645 472 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 NMIQ13287 307 aaPredicted RBP22.46■■□□□ 1.19
CLN6-221ENST00000637494 VPS53Q5VIR6 699 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 LHX8Q68G74 356 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 CHRDL2Q6WN34 429 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 KIFC2Q96AC6 838 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 OSBPL3Q9H4L5 887 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 ZNF214Q9UL59 606 aaPredicted RBP22.46■■□□□ 1.19
CLN6-221ENST00000637494 STX8Q9UNK0 236 aa22.46■■□□□ 1.19
CLN6-221ENST00000637494 COBLO75128 1261 aa22.45■■□□□ 1.18
CLN6-221ENST00000637494 FDX1P10109 184 aa22.45■■□□□ 1.18
CLN6-221ENST00000637494 IKQ13123 557 aaPredicted RBP22.45■■□□□ 1.18
CLN6-221ENST00000637494 SNRNP48Q6IEG0 339 aaKnown RBP22.45■■□□□ 1.18
CLN6-221ENST00000637494 PLEKHM2Q8IWE5 1019 aa22.45■■□□□ 1.18
CLN6-221ENST00000637494 MAML3Q96JK9 1138 aa22.45■■□□□ 1.18
CLN6-221ENST00000637494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.45■■□□□ 1.187e-6■■■■■ 33.6
CLN6-221ENST00000637494 COL11A1P12107 1806 aaPredicted RBP22.45■■□□□ 1.18
CLN6-221ENST00000637494 HIP1O00291 1037 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 CYBAP13498 195 aa22.44■■□□□ 1.18
CLN6-221ENST00000637494 SLC4A3P48751 1232 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms