RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 SMIM22K7EJ46 135 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 NEFLP07196 543 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 FCER1AP12319 257 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 CDK8P49336 464 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 AMOTL1Q8IY63 956 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 FERMT2Q96AC1 680 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 HAUS7Q99871 368 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 VCPKMTQ9H867 229 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 TMX2Q9Y320 296 aa18.65■□□□□ 0.58
SNRNP48-203ENST00000634363 USP17L12C9JPN9 530 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 USP17L21D6R901 530 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 SEPT4O43236 478 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 IGHA2P01877 340 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 ADD2P35612 726 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 ADCYAP1R1P41586 468 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.64■□□□□ 0.571e-7■■■■■ 27.7
SNRNP48-203ENST00000634363 TTC41PQ6P2S7 1318 aa18.64■□□□□ 0.57
SNRNP48-203ENST00000634363 COL11A1P12107 1806 aaPredicted RBP18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 SMCHD1A6NHR9 2005 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 ERC2O15083 957 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 CHGBP05060 677 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 MX1P20591 662 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 TMEM132BQ14DG7 1078 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 C12orf60Q5U649 245 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 MAML3Q96JK9 1138 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 CCDC17Q96LX7 622 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 LNPKQ9C0E8 428 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 COL6A3P12111 3177 aa18.63■□□□□ 0.57
SNRNP48-203ENST00000634363 POTEB2H3BUK9 544 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 EEF2P13639 858 aaKnown RBP18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 TRIM60Q495X7 471 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 OTUD7AQ8TE49 926 aaPredicted RBP18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 MMP19Q99542 508 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 FBXO28Q9NVF7 368 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 SLC4A4Q9Y6R1 1079 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 ZNF236Q9UL36 1845 aa18.62■□□□□ 0.57
SNRNP48-203ENST00000634363 A0A0G2JMZ2 1700 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 SLC25A27O95847 323 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 PGK2P07205 417 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 LRRC41Q15345 812 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 SHHQ15465 462 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 CHD1LQ86WJ1 897 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 STK11IPQ8N1F8 1099 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 BADQ92934 168 aa18.61■□□□□ 0.57
SNRNP48-203ENST00000634363 FAM47AQ5JRC9 791 aa18.6■□□□□ 0.57
SNRNP48-203ENST00000634363 C16orf86Q6ZW13 317 aa18.6■□□□□ 0.57
SNRNP48-203ENST00000634363 KANSL2Q9H9L4 492 aa18.6■□□□□ 0.57
SNRNP48-203ENST00000634363 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
SNRNP48-203ENST00000634363 MYH7P12883 1935 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 LTBP2Q14767 1821 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 STAT3P40763 770 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 NUCB1Q02818 461 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 KCTD2Q14681 263 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 ZNF697Q5TEC3 545 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 FAM109BQ6ICB4 259 aaPredicted RBP18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 GUCD1Q96NT3 240 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 XPNPEP3Q9NQH7 507 aa18.59■□□□□ 0.57
SNRNP48-203ENST00000634363 PLXNA1Q9UIW2 1896 aa18.58■□□□□ 0.57
SNRNP48-203ENST00000634363 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.57
SNRNP48-203ENST00000634363 PGK1P00558 417 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 RARBP10826 455 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 SLC4A3P48751 1232 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 UBE3CQ15386 1083 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 C9orf50Q5SZB4 431 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 FAM83BQ5T0W9 1011 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 ZSCAN25Q6NSZ9 544 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 PUS7LQ9H0K6 701 aaKnown RBP18.58■□□□□ 0.56
SNRNP48-203ENST00000634363 TRIM43BA6NCK2 446 aa18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 VWA5AO00534 786 aa18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 TLE2Q04725 743 aa18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 TRIM43Q96BQ3 446 aaPredicted RBP18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 TINF2Q9BSI4 451 aa18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 ADAMTS5Q9UNA0 930 aa18.57■□□□□ 0.56
SNRNP48-203ENST00000634363 TAL1P17542 331 aaPredicted RBP18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 PDE1AP54750 535 aa18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 RNF180Q86T96 592 aa18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 NUP88Q99567 741 aaPredicted RBP18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 MKNK2Q9HBH9 465 aa18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 PDLIM7Q9NR12 457 aa18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 PPP1R9AQ9ULJ8 1098 aa18.56■□□□□ 0.56
SNRNP48-203ENST00000634363 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 MINDY4BA8MYZ0 360 aa18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 SNX17Q15036 470 aa18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 LRRFIP1Q32MZ4 808 aaKnown RBP18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 ZNF792Q3KQV3 632 aa18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 KBTBD3Q8NAB2 608 aa18.55■□□□□ 0.56
SNRNP48-203ENST00000634363 TACC3Q9Y6A5 838 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms