RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 H0YGN5 161 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 SLC25A27O95847 323 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 TTLL1O95922 423 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 ADORA2AP29274 412 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 TFAP4Q01664 338 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 NUCB1Q02818 461 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
SSBP4-215ENST00000625926 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 SLC5A4Q9NY91 659 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 NR2E3Q9Y5X4 410 aa12.89□□□□□ -0.35
SSBP4-215ENST00000625926 PTPRFP10586 1907 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 VWA5AO00534 786 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 FOXP2O15409 715 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 NDUFB10O96000 172 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
SSBP4-215ENST00000625926 STAT3P40763 770 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 MCMDC2Q4G0Z9 681 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 RILPL2Q969X0 211 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
SSBP4-215ENST00000625926 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 FLRT1Q9NZU1 646 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 CDK5RAP2Q96SN8 1893 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 MYH1P12882 1939 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 ATAD5Q96QE3 1844 aa12.88□□□□□ -0.35
SSBP4-215ENST00000625926 FCER1AP12319 257 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 COPB2P35606 906 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 ALX1Q15699 326 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 RIOX2Q8IUF8 465 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
SSBP4-215ENST00000625926 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 FAM227BQ96M60 508 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
SSBP4-215ENST00000625926 A0A0D9SFI3 127 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 EVI5O60447 810 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 COBLO75128 1261 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 CYP2C19P33261 490 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 NMIQ13287 307 aaPredicted RBP12.86□□□□□ -0.35
SSBP4-215ENST00000625926 KCTD2Q14681 263 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 LHX8Q68G74 356 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 SLC17A8Q8NDX2 589 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
SSBP4-215ENST00000625926 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
SSBP4-215ENST00000625926 ZNF214Q9UL59 606 aaPredicted RBP12.86□□□□□ -0.35
SSBP4-215ENST00000625926 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■□□ 17.4
SSBP4-215ENST00000625926 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
SSBP4-215ENST00000625926 RBBP6Q7Z6E9 1792 aaKnown RBP12.86□□□□□ -0.35
SSBP4-215ENST00000625926 PLIN4Q96Q06 1357 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 MSCO60682 206 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 ZBED4O75132 1171 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 IGHA2P01877 340 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 FGAP02671 866 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 HSPD1P10809 573 aaKnown RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 SDSP20132 328 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 CNGA1P29973 690 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 SLFN13Q68D06 897 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 MMP19Q99542 508 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
SSBP4-215ENST00000625926 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
SSBP4-215ENST00000625926 ATP2A1O14983 1001 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 ORC4O43929 436 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
SSBP4-215ENST00000625926 FGRP09769 529 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 BMP3P12645 472 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 CYBAP13498 195 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 ZNF589Q86UQ0 364 aaPredicted RBP12.84□□□□□ -0.35
SSBP4-215ENST00000625926 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 CCDC171Q6TFL3 1326 aa12.84□□□□□ -0.35
SSBP4-215ENST00000625926 TMEM232C9JQI7 657 aa12.83□□□□□ -0.36
SSBP4-215ENST00000625926 PGK2P07205 417 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms