RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 ENTPD3O75355 529 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 SLC39A14Q15043 492 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 STAG2Q8N3U4 1231 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 MRFAP1L1Q96HT8 127 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 CCDC17Q96LX7 622 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 SGIP1Q9BQI5 828 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 BRMS1Q9HCU9 246 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 TCP10Q12799 353 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 RILPL1Q5EBL4 403 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 PPP4R3BQ5MIZ7 849 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 OGFOD1Q8N543 542 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 TAOK3Q9H2K8 898 aa23.06■■□□□ 1.28
UBAP1-204ENST00000625521 TDRD3Q9H7E2 651 aaKnown RBP23.06■■□□□ 1.28
UBAP1-204ENST00000625521 GTF2F1P35269 517 aaKnown RBP eCLIP23.05■■□□□ 1.282e-6■■■■■ 81.7
UBAP1-204ENST00000625521 KRT2P35908 639 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 JMYQ8N9B5 988 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 CACTINQ8WUQ7 758 aaKnown RBP23.05■■□□□ 1.28
UBAP1-204ENST00000625521 SHISA4Q96DD7 197 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 PRMT6Q96LA8 375 aaPredicted RBP23.05■■□□□ 1.28
UBAP1-204ENST00000625521 SDF4Q9BRK5 362 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 PDCL3Q9H2J4 239 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 KIAA1468Q9P260 1216 aa23.05■■□□□ 1.28
UBAP1-204ENST00000625521 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
UBAP1-204ENST00000625521 PPP6R2O75170 966 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 AGBL3Q8NEM8 1001 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 COL2A1P02458 1487 aaPredicted RBP23.04■■□□□ 1.28
UBAP1-204ENST00000625521 ATRNL1Q5VV63 1379 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 DDTLA6NHG4 134 aaPredicted RBP23.04■■□□□ 1.28
UBAP1-204ENST00000625521 SPDYE2BA6NHP3 402 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 PARP1P09874 1014 aaKnown RBP23.04■■□□□ 1.28
UBAP1-204ENST00000625521 SPDYE6P0CI01 402 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 CMA1P23946 247 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 FOXP4Q8IVH2 680 aaPredicted RBP23.04■■□□□ 1.28
UBAP1-204ENST00000625521 ZSCAN29Q8IWY8 852 aaPredicted RBP23.04■■□□□ 1.28
UBAP1-204ENST00000625521 CEP57L1Q8IYX8 460 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 FAM13BQ9NYF5 915 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 TMOD2Q9NZR1 351 aa23.04■■□□□ 1.28
UBAP1-204ENST00000625521 BECN2A8MW95 431 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 TTLL1O95922 423 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 NR5A1Q13285 461 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 UPF1Q92900 1129 aaKnown RBP eCLIP23.03■■□□□ 1.283e-12■■■■■ 40.5
UBAP1-204ENST00000625521 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 ZNF202O95125 648 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 SMARCA1P28370 1054 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 PTPAQ15257 358 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 SH3BP5LQ7L8J4 393 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 OXER1Q8TDS5 423 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 SPZ1Q9BXG8 430 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 TRIM34Q9BYJ4 488 aa23.03■■□□□ 1.28
UBAP1-204ENST00000625521 PFKFB1P16118 471 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 DLGAP5Q15398 846 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 METTL16Q86W50 562 aaKnown RBP23.02■■□□□ 1.28
UBAP1-204ENST00000625521 AOPEPQ8N6M6 819 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 JDP2Q8WYK2 163 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 DNAJC18Q9H819 358 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.02■■□□□ 1.28
UBAP1-204ENST00000625521 MTMR7Q9Y216 660 aa23.02■■□□□ 1.28
UBAP1-204ENST00000625521 MYH6P13533 1939 aa23.02■■□□□ 1.27
UBAP1-204ENST00000625521 KLRF2D3W0D1 207 aa23.01■■□□□ 1.27
UBAP1-204ENST00000625521 DPCR1Q3MIW9 517 aa23.01■■□□□ 1.27
UBAP1-204ENST00000625521 FAM177A1Q8N128 213 aaPredicted RBP23.01■■□□□ 1.27
UBAP1-204ENST00000625521 MARCKSP29966 332 aaPredicted RBP23.01■■□□□ 1.27
UBAP1-204ENST00000625521 ZBTB12Q9Y330 459 aaPredicted RBP23.01■■□□□ 1.27
UBAP1-204ENST00000625521 BRCA1P38398 1863 aaKnown RBP23■■□□□ 1.27
UBAP1-204ENST00000625521 MPHOSPH10O00566 681 aaKnown RBP23■■□□□ 1.27
UBAP1-204ENST00000625521 CYTH3O43739 400 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 CALML3P27482 149 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 TOB1P50616 345 aaPredicted RBP23■■□□□ 1.27
UBAP1-204ENST00000625521 NLRP5P59047 1200 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 CXCL9Q07325 125 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 TATDN1Q6P1N9 297 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 MTMR14Q8NCE2 650 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 BPIFA3Q9BQP9 254 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 NAT10Q9H0A0 1025 aaKnown RBP23■■□□□ 1.27
UBAP1-204ENST00000625521 CABP5Q9NP86 173 aa23■■□□□ 1.27
UBAP1-204ENST00000625521 PDHBP11177 359 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 NPY5RQ15761 445 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 CERKLQ49MI3 558 aaPredicted RBP22.99■■□□□ 1.27
UBAP1-204ENST00000625521 USP17L2Q6R6M4 530 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 CEP131Q9UPN4 1083 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 HPSEQ9Y251 543 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 NFKBIEO00221 500 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 GOLGA8HP0CJ92 632 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 SNHG28P0DPA3 235 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 PTGER2P43116 358 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 ASPRV1Q53RT3 343 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 CIAPIN1Q6FI81 312 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 LRRC8AQ8IWT6 810 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 BCS1LQ9Y276 419 aa22.99■■□□□ 1.27
UBAP1-204ENST00000625521 FAM237AA0A1B0GTK4 181 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 ARID5BQ14865 1188 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 SLC35G1Q2M3R5 365 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 SHC4Q6S5L8 630 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 TNFRSF25Q93038 417 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 FER1L6Q2WGJ9 1857 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 MYH8P13535 1937 aa22.98■■□□□ 1.27
UBAP1-204ENST00000625521 GOLGB1Q14789 3259 aaKnown RBP22.98■■□□□ 1.27
UBAP1-204ENST00000625521 USP17L5A8MUK1 530 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms