RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 JAK2O60674 1132 aa12.61□□□□□ -0.39
CLIP1-219ENST00000620786 RNASE9P60153 205 aaKnown RBP12.61□□□□□ -0.39
CLIP1-219ENST00000620786 TBC1D31Q96DN5 1066 aa12.61□□□□□ -0.39
CLIP1-219ENST00000620786 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
CLIP1-219ENST00000620786 DDAH1O94760 285 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 PHKA1P46020 1223 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 NLRP12P59046 1061 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 MLKLQ8NB16 471 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 STAMQ92783 540 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 ST7Q9NRC1 585 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.398e-7■■■■□ 22.7
CLIP1-219ENST00000620786 BBOX1O75936 387 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 MED23Q9ULK4 1368 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 FAM173BQ6P4H8 233 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 HSPA4P34932 840 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
CLIP1-219ENST00000620786 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 APOL6Q9BWW8 343 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
CLIP1-219ENST00000620786 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 PDE8BO95263 885 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 GDF11O95390 407 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 OATP04181 439 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 DMP1Q13316 513 aaPredicted RBP12.59□□□□□ -0.39
CLIP1-219ENST00000620786 RSPH3Q86UC2 560 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 LRFN2Q9ULH4 789 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 H0YCG3 227 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 ADORA1P30542 326 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 CLUL1Q15846 466 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 SEPT14Q6ZU15 432 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 ABI1Q8IZP0 508 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
CLIP1-219ENST00000620786 PUS3Q9BZE2 481 aaKnown RBP12.59□□□□□ -0.39
CLIP1-219ENST00000620786 GNA14O95837 355 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
CLIP1-219ENST00000620786 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 GCC2Q8IWJ2 1684 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 FAM170AA1A519 330 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 GMNNO75496 209 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 SEC24BO95487 1268 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 IREB2P48200 963 aaKnown RBP12.59□□□□□ -0.39
CLIP1-219ENST00000620786 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 USP44Q9H0E7 712 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
CLIP1-219ENST00000620786 LRRIQ4A6NIV6 560 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 CAPN9O14815 690 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 TFDP1Q14186 410 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.39
CLIP1-219ENST00000620786 FANCBQ8NB91 859 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 PANK4Q9NVE7 773 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 ANKFY1Q9P2R3 1169 aa12.58□□□□□ -0.39
CLIP1-219ENST00000620786 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.39
CLIP1-219ENST00000620786 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.39
CLIP1-219ENST00000620786 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.39
CLIP1-219ENST00000620786 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 SCG2P13521 617 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 FANCCQ00597 558 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 PPP2R5CQ13362 524 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 AKT3Q9Y243 479 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 DTNBO60941 627 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 ZBTB9Q96C00 473 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 SERTAD1Q9UHV2 236 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 NPR1P16066 1061 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 ATP5DP30049 168 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 TPD52P55327 224 aaPredicted RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 SECISBP2LQ93073 1101 aaKnown RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 CIAO1O76071 339 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 TUBB4BP68371 445 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 UBXN2AP68543 259 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 CASC4Q6P4E1 433 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
CLIP1-219ENST00000620786 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 PCDHA1Q9Y5I3 950 aa12.58□□□□□ -0.4
CLIP1-219ENST00000620786 OR52Z1P0C646 297 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 Q3C1V9 767 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 ACTN4O43707 911 aaKnown RBP12.57□□□□□ -0.4
CLIP1-219ENST00000620786 KRT81Q14533 505 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 SSH3Q8TE77 659 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 GIPC1O14908 333 aa12.57□□□□□ -0.4
CLIP1-219ENST00000620786 CSPG5O95196 566 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms