RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 ARMC9Q7Z3E5 817 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 NLRP14Q86W24 1093 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 CCDC114Q96M63 670 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 MED15Q96RN5 788 aa12.01□□□□□ -0.49
CPEB1-215ENST00000617958 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
CPEB1-215ENST00000617958 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 E7EWF7 191 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 MARCKSP29966 332 aaPredicted RBP12□□□□□ -0.49
CPEB1-215ENST00000617958 PRPHP41219 470 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 SND1Q7KZF4 910 aaKnown RBP eCLIP12□□□□□ -0.49
CPEB1-215ENST00000617958 CEP57Q86XR8 500 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 CCT8L2Q96SF2 557 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 EBF2Q9HAK2 575 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
CPEB1-215ENST00000617958 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
CPEB1-215ENST00000617958 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 A1BGP04217 495 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 GBP2P32456 591 aaPredicted RBP12□□□□□ -0.49
CPEB1-215ENST00000617958 GCKP35557 465 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
CPEB1-215ENST00000617958 RNF187Q5TA31 235 aaPredicted RBP12□□□□□ -0.49
CPEB1-215ENST00000617958 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
CPEB1-215ENST00000617958 CCHCR1Q8TD31 782 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 SH3BP1Q9Y3L3 701 aa12□□□□□ -0.49
CPEB1-215ENST00000617958 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 DNAJC8O75937 253 aaPredicted RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 SNUPNO95149 360 aaKnown RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 GHRP10912 638 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 GLE1Q53GS7 698 aaKnown RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 TTC39AQ5SRH9 613 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 SLC9C2Q5TAH2 1124 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 EPN1Q9Y6I3 576 aaPredicted RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 C4AP0C0L4 1744 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 TOGARAM1Q9Y4F4 1720 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 NDUFA10O95299 355 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 ABL1P00519 1130 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 PRLRP16471 622 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 NAA25Q14CX7 972 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 PDCD2Q16342 344 aaPredicted RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 MREGQ8N565 214 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 CCDC47Q96A33 483 aaKnown RBP11.99□□□□□ -0.49
CPEB1-215ENST00000617958 ARL8AQ96BM9 186 aa11.99□□□□□ -0.49
CPEB1-215ENST00000617958 NEFHP12036 1026 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 MDH1P40925 334 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 RIPK1Q13546 671 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 ARFGAP2Q8N6H7 521 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 KRI1Q8N9T8 703 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 CALR3Q96L12 384 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 HAUS7Q99871 368 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 QTRT2Q9H974 415 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 TTC36A6NLP5 189 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 HMGB1P1B2RPK0 211 aaPredicted RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 PECAM1P16284 738 aaPredicted RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 KRT83P78385 493 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 SPAG1Q07617 926 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 ANKRD20A8PQ5CZ79 823 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 OTUD7BQ6GQQ9 843 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 TTC5Q8N0Z6 440 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 RNPC3Q96LT9 517 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 CENPHQ9H3R5 247 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 LIMA1Q9UHB6 759 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
CPEB1-215ENST00000617958 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
CPEB1-215ENST00000617958 IPO7O95373 1038 aaKnown RBP11.97□□□□□ -0.49
CPEB1-215ENST00000617958 PDHBP11177 359 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 IFT88Q13099 833 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 CUL4BQ13620 913 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 HSP90AA4PQ58FG1 418 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 VPS37DQ86XT2 251 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 TRMT44Q8IYL2 757 aaKnown RBP11.97□□□□□ -0.49
CPEB1-215ENST00000617958 IQCKQ8N0W5 287 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 KBTBD3Q8NAB2 608 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 RASSF8Q8NHQ8 419 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 PSMD1Q99460 953 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 SPATA31A6Q5VVP1 1343 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 UBN2Q6ZU65 1347 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 SYNRGQ9UMZ2 1314 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 C5orf60A6NFR6 353 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 KRT86O43790 486 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 NR1D1P20393 614 aa11.97□□□□□ -0.49
CPEB1-215ENST00000617958 VPS72Q15906 364 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms