RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 RGS2P41220 211 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
COL4A1-205ENST00000615732 MORN1Q5T089 497 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 LHX8Q68G74 356 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 APPBP2Q92624 585 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
COL4A1-205ENST00000615732 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 TM6SF1Q9BZW5 370 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
COL4A1-205ENST00000615732 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
COL4A1-205ENST00000615732 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 MYH1P12882 1939 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L15C9J2P7 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L13C9JLJ4 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L11C9JVI0 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L18D6R9N7 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L22D6RA61 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L17D6RBQ6 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L19D6RCP7 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L20D6RJB6 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 M0R2C6 588 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 MPHOSPH10O00566 681 aaKnown RBP12.65□□□□□ -0.38
COL4A1-205ENST00000615732 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 USP17L24Q0WX57 530 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 SEPT2Q15019 361 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 TRMT44Q8IYL2 757 aaKnown RBP12.65□□□□□ -0.38
COL4A1-205ENST00000615732 LCORLQ8N3X6 602 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 GTF3C2Q8WUA4 911 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-205ENST00000615732 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 KIAA1683Q9H0B3 1180 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-205ENST00000615732 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 FLRT1Q9NZU1 646 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
COL4A1-205ENST00000615732 SPDYE16A6NNV3 312 aaPredicted RBP12.64□□□□□ -0.39
COL4A1-205ENST00000615732 IGSF3O75054 1194 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 CHGBP05060 677 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 USP14P54578 494 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 CATSPERGQ6ZRH7 1159 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
COL4A1-205ENST00000615732 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 EYSQ5T1H1 3165 aa12.64□□□□□ -0.39
COL4A1-205ENST00000615732 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 ADD2P35612 726 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 CCNA1P78396 465 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
COL4A1-205ENST00000615732 GABPAQ06546 454 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
COL4A1-205ENST00000615732 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 DYNLL2Q96FJ2 89 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
COL4A1-205ENST00000615732 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 PRKAB2O43741 272 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 MBD4O95243 580 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
COL4A1-205ENST00000615732 PTPREP23469 700 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 DDIT3P35638 169 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 AK2P54819 239 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 NUCB2P80303 420 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 ANKRD1Q15327 319 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 ADCK5Q3MIX3 580 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 TSGA10IPQ3SY00 556 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 KIAA1755Q5JYT7 1200 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
COL4A1-205ENST00000615732 TTC14Q96N46 770 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
COL4A1-205ENST00000615732 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
COL4A1-205ENST00000615732 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 GPAA1O43292 621 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 CPA1P15085 419 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 CNGA1P29973 690 aa12.61□□□□□ -0.39
COL4A1-205ENST00000615732 CYP2C19P33261 490 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms