RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CTNND2Q9UQB3 1225 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CAND2O75155 1236 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 PPP6R2O75170 966 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 PHKG2P15735 406 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 WLSQ5T9L3 541 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 CAPRIN2Q6IMN6 1127 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 GPIHBP1Q8IV16 184 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 NSMCE1Q8WV22 266 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 MAPK8IP1Q9UQF2 711 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZMYM6O95789 1325 aa11.58□□□□□ -0.56
TNFAIP3-208ENST00000615468 PDE2AO00408 941 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 RASSF9O75901 435 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 PAFAH1B1P43034 410 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 EPHB4P54760 987 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 SNX1Q13596 522 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ACCSLQ4AC99 568 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ACTR5Q9H9F9 607 aaPredicted RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 COL15A1P39059 1388 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 PSMD2Q13200 908 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 PTGISQ16647 500 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 CCDC96Q2M329 555 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 C8orf74Q6P047 294 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 SMARCAL1Q9NZC9 954 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 SALL1Q9NSC2 1324 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZCRB1Q8TBF4 217 aaKnown RBP11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 LMBR1Q8WVP7 490 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ETAA1Q9NY74 926 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 PXDNQ92626 1479 aa11.57□□□□□ -0.56
TNFAIP3-208ENST00000615468 ESYT3A0FGR9 886 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 HSPD1P10809 573 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 KRT83P78385 493 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 CYP27A1Q02318 531 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.569e-6■□□□□ 9.4
TNFAIP3-208ENST00000615468 ARMC3Q5W041 872 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 SLC52A2Q9HAB3 445 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 SNRKQ9NRH2 765 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 ATP5JP18859 108 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 METAP2P50579 478 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 GRIN1Q05586 938 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 KIF5AQ12840 1032 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 RRAGBQ5VZM2 374 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 ATP6V0A4Q9HBG4 840 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 NALCNQ8IZF0 1738 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZNF609O15014 1411 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 KLHL33A6NCF5 533 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 RNF225M0QZC1 329 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 ERCC5P28715 1186 aaPredicted RBP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 SKOR1P84550 965 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 MORC3Q14149 939 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 CACNA2D3Q8IZS8 1091 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 AENQ8WTP8 325 aaKnown RBP11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 STAMBPL1Q96FJ0 436 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 TUBGCP6Q96RT7 1819 aa11.56□□□□□ -0.56
TNFAIP3-208ENST00000615468 ZPR1O75312 459 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 IARSP41252 1262 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 RWDD2BP57060 319 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 RASSF8Q8NHQ8 419 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 CYFIP2Q96F07 1278 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 NFU1Q9UMS0 254 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 XRN1Q8IZH2 1706 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 PSMD14O00487 310 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 MDH1P40925 334 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 RNASE9P60153 205 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 UBE3BQ7Z3V4 1068 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPAG5Q96R06 1193 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 FAM107AO95990 144 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 MYBL1P10243 752 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 CYLC1P35663 651 aaPredicted RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 KRT31Q15323 416 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 SPA17Q15506 151 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 THEMIS2Q5TEJ8 643 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 KBTBD3Q8NAB2 608 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 MED15Q96RN5 788 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 SLC26A6Q9BXS9 759 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 NUCKS1Q9H1E3 243 aaKnown RBP11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 DUSP10Q9Y6W6 482 aa11.55□□□□□ -0.56
TNFAIP3-208ENST00000615468 CDKL5O76039 1030 aa11.54□□□□□ -0.56
TNFAIP3-208ENST00000615468 PLCB4Q15147 1175 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms