RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 CNNM2Q9H8M5 875 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 SERTAD1Q9UHV2 236 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
ATF3-211ENST00000613954 QSER1Q2KHR3 1735 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 MAST2Q6P0Q8 1798 aa12.7□□□□□ -0.38
ATF3-211ENST00000613954 B4E1Z4 1266 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 FOXN1O15353 648 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 RXRAP19793 462 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 FILIP1LQ4L180 1135 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 ADAM21Q9UKJ8 722 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 RAB21Q9UL25 225 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 PRKAB2O43741 272 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 CAPN2P17655 700 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 TDO2P48775 406 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 RCAN1P53805 252 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 MECOMQ03112 1051 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 CNGA4Q8IV77 575 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 KRT23Q9C075 422 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
ATF3-211ENST00000613954 TTF2Q9UNY4 1162 aaKnown RBP12.69□□□□□ -0.38
ATF3-211ENST00000613954 LTBP1Q14766 1721 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 BAG6P46379 1132 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 IGSF22Q8N9C0 903 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 GPR101Q96P66 508 aaPredicted RBP12.68□□□□□ -0.38
ATF3-211ENST00000613954 DESI2Q9BSY9 194 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
ATF3-211ENST00000613954 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
ATF3-211ENST00000613954 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 BTBD18B2RXH4 712 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 DEXIO95424 95 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 IVLP07476 585 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 PRR29P0C7W0 189 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 IL1R1P14778 569 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 SART3Q15020 963 aaKnown RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 BEND6Q5SZJ8 279 aaPredicted RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 LEKR1Q6ZMV7 388 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 ACBD3Q9H3P7 528 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 POLLQ9UGP5 575 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 FEZ2Q9UHY8 353 aaPredicted RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 CHD4Q14839 1912 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 PRDX5P30044 214 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 ACTN2P35609 894 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 PBX1P40424 430 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 WHAMMP3Q1A5X7 153 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 TRMT44Q8IYL2 757 aaKnown RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 ANKZF1Q9H8Y5 726 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 LZTFL1Q9NQ48 299 aa12.67□□□□□ -0.38
ATF3-211ENST00000613954 COL11A2P13942 1736 aaPredicted RBP12.67□□□□□ -0.38
ATF3-211ENST00000613954 SYNRGQ9UMZ2 1314 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 MFAP3LO75121 409 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
ATF3-211ENST00000613954 FECHP22830 423 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 LMAN1P49257 510 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 DYNLL1P63167 89 aaKnown RBP12.66□□□□□ -0.38
ATF3-211ENST00000613954 RBL2Q08999 1139 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 RTN1Q16799 776 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 AKNAD1Q5T1N1 836 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 TMTC1Q8IUR5 882 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 SENP2Q9HC62 589 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 AATFQ9NY61 560 aaKnown RBP eCLIP12.66□□□□□ -0.38
ATF3-211ENST00000613954 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
ATF3-211ENST00000613954 CCDC88AQ3V6T2 1871 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms