RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
SRRT-213ENST00000611405 ARL6IP4Q66PJ3 421 aaKnown RBP13.57□□□□□ -0.24
SRRT-213ENST00000611405 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 PAGE5Q96GU1 130 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 VWA3AA6NCI4 1184 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 ERCC5P28715 1186 aaPredicted RBP13.57□□□□□ -0.24
SRRT-213ENST00000611405 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 ARMCX5Q6P1M9 558 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 C16orf45Q96MC5 204 aaPredicted RBP13.57□□□□□ -0.24
SRRT-213ENST00000611405 COA1Q9GZY4 146 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
SRRT-213ENST00000611405 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.246e-7■□□□□ 8.4
SRRT-213ENST00000611405 KCNJ6P48051 423 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 PAXBP1Q9Y5B6 917 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 LRRC37AA6NMS7 1700 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 MCM7P33993 719 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
SRRT-213ENST00000611405 VSTM4Q8IW00 320 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
SRRT-213ENST00000611405 DPF2Q92785 391 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 GSDMAQ96QA5 445 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 SPZ1Q9BXG8 430 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 BARHL2Q9NY43 387 aa13.56□□□□□ -0.24
SRRT-213ENST00000611405 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 M0R2N6 131 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 TOP1P11387 765 aaKnown RBP13.55□□□□□ -0.24
SRRT-213ENST00000611405 ZNF18P17022 549 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 SMARCA1P28370 1054 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 LONP1P36776 959 aaKnown RBP13.55□□□□□ -0.24
SRRT-213ENST00000611405 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.244e-6■■□□□ 11.9
SRRT-213ENST00000611405 DPYDQ12882 1025 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 PROM2Q8N271 834 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 NLGN1Q8N2Q7 840 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 NFE2L3Q9Y4A8 694 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 CCDC194A0A1B0GVG4 234 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 STXBP3O00186 592 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
SRRT-213ENST00000611405 CYTH3O43739 400 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 AFMP43652 599 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 GTF2IP78347 998 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
SRRT-213ENST00000611405 LTBP1Q14766 1721 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 NPR1P16066 1061 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 NOVP48745 357 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 PTPN14Q15678 1187 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 E2F4Q16254 413 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 CCDC112Q8NEF3 446 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 CDK11BP21127 795 aaKnown RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 IL17AQ16552 155 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
SRRT-213ENST00000611405 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
SRRT-213ENST00000611405 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
SRRT-213ENST00000611405 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
SRRT-213ENST00000611405 TXLNAP40222 546 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 CDK5RAP2Q96SN8 1893 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 USP27XA6NNY8 438 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
SRRT-213ENST00000611405 MTMR7Q9Y216 660 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 BAZ2BQ9UIF8 2168 aaKnown RBP13.53□□□□□ -0.24
SRRT-213ENST00000611405 SRGNP10124 158 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
SRRT-213ENST00000611405 LAD1O00515 517 aa13.52□□□□□ -0.24
SRRT-213ENST00000611405 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.24
SRRT-213ENST00000611405 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.24
SRRT-213ENST00000611405 ALDH1B1P30837 517 aa13.52□□□□□ -0.24
SRRT-213ENST00000611405 TRMT44Q8IYL2 757 aaKnown RBP13.52□□□□□ -0.24
SRRT-213ENST00000611405 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.24
SRRT-213ENST00000611405 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.24
SRRT-213ENST00000611405 CEP95Q96GE4 821 aa13.52□□□□□ -0.24
SRRT-213ENST00000611405 PLIN4Q96Q06 1357 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 CCP110O43303 1012 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 CUL4BQ13620 913 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 MED15Q96RN5 788 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
SRRT-213ENST00000611405 INTS13Q9NVM9 706 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms