RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SLC25A27O95847 323 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 CHGBP05060 677 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 SLC4A3P48751 1232 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 KCTD2Q14681 263 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 UBE3CQ15386 1083 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 C16orf86Q6ZW13 317 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 KANSL2Q9H9L4 492 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 CTDP1Q9Y5B0 961 aaPredicted RBP17.84■□□□□ 0.45
CTSA-216ENST00000607212 PARP14Q460N5 1801 aa17.84■□□□□ 0.45
CTSA-216ENST00000607212 RANBP2P49792 3224 aaKnown RBP17.83■□□□□ 0.45
CTSA-216ENST00000607212 SMIM22K7EJ46 135 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 GPATCH3Q96I76 525 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 MAML3Q96JK9 1138 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 FBXO28Q9NVF7 368 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 ARPP21Q9UBL0 812 aaPredicted RBP17.83■□□□□ 0.44
CTSA-216ENST00000607212 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 PLXNA1Q9UIW2 1896 aa17.83■□□□□ 0.44
CTSA-216ENST00000607212 MINDY4BA8MYZ0 360 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 FAM83BQ5T0W9 1011 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 SLC39A5Q6ZMH5 540 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 SIAH1Q8IUQ4 282 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 ABRAQ8N0Z2 381 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 FAM161BQ96MY7 647 aa17.82■□□□□ 0.44
CTSA-216ENST00000607212 PUS7LQ9H0K6 701 aaKnown RBP17.82■□□□□ 0.44
CTSA-216ENST00000607212 PGK2P07205 417 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 RARBP10826 455 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 STAT3P40763 770 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 ADCYAP1R1P41586 468 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 TRIM60Q495X7 471 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 FAM47AQ5JRC9 791 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 CTR9Q6PD62 1173 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 MTMR10Q9NXD2 777 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
CTSA-216ENST00000607212 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
CTSA-216ENST00000607212 COPB2P35606 906 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 LRRC41Q15345 812 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 XPNPEP3Q9NQH7 507 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 PPP1R9AQ9ULJ8 1098 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 SMCHD1A6NHR9 2005 aa17.8■□□□□ 0.44
CTSA-216ENST00000607212 VWA5AO00534 786 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 APPP05067 770 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 TDO2P48775 406 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 ZNF697Q5TEC3 545 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 RNF180Q86T96 592 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 RIOX2Q8IUF8 465 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 NUP88Q99567 741 aaPredicted RBP17.79■□□□□ 0.44
CTSA-216ENST00000607212 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
CTSA-216ENST00000607212 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
CTSA-216ENST00000607212 BADQ92934 168 aa17.78■□□□□ 0.44
CTSA-216ENST00000607212 DDX11Q96FC9 970 aa17.78■□□□□ 0.44
CTSA-216ENST00000607212 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
CTSA-216ENST00000607212 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
CTSA-216ENST00000607212 PGK1P00558 417 aa17.77■□□□□ 0.44
CTSA-216ENST00000607212 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.44
CTSA-216ENST00000607212 SNRNP48Q6IEG0 339 aaKnown RBP17.77■□□□□ 0.44
CTSA-216ENST00000607212 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
CTSA-216ENST00000607212 CPXCR1Q8N123 301 aa17.77■□□□□ 0.44
CTSA-216ENST00000607212 IGHA2P01877 340 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 AKR1A1P14550 325 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 APPBP2Q92624 585 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 KIFC2Q96AC6 838 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
CTSA-216ENST00000607212 TEX13BQ9BXU2 312 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 ZNF287Q9HBT7 754 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 PDLIM7Q9NR12 457 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 NRBP1Q9UHY1 535 aa17.76■□□□□ 0.43
CTSA-216ENST00000607212 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
CTSA-216ENST00000607212 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 ZBED4O75132 1171 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 TAL1P17542 331 aaPredicted RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 RASA1P20936 1047 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 TLE2Q04725 743 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 SHHQ15465 462 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 ZNF792Q3KQV3 632 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 LENG1Q96BZ8 264 aaPredicted RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 ZNF214Q9UL59 606 aaPredicted RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 ADAMTS5Q9UNA0 930 aa17.75■□□□□ 0.43
CTSA-216ENST00000607212 DIS3Q9Y2L1 958 aaKnown RBP17.75■□□□□ 0.43
CTSA-216ENST00000607212 GSG1L2A8MUP6 293 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 F5H6K3 240 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 GPAA1O43292 621 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 PRDM1O75626 825 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 NDUFB10O96000 172 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 KLRC3Q07444 240 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 SBK1Q52WX2 424 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 C9orf50Q5SZB4 431 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 SH3RF1Q7Z6J0 888 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 NYAP2Q9P242 653 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
CTSA-216ENST00000607212 ZFYP08048 801 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms