RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PAWRQ96IZ0 340 aaKnown RBP27.4■■□□□ 1.98
SSBP4-205ENST00000598159 OGDHLQ9ULD0 1010 aa27.4■■□□□ 1.98
SSBP4-205ENST00000598159 F5H6K3 240 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 H0YGN5 161 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 SLC25A27O95847 323 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 KLRC3Q07444 240 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 FAM83BQ5T0W9 1011 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 B4GALNT3Q6L9W6 998 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 ABRAQ8N0Z2 381 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 NEDD1Q8NHV4 660 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 NPLOC4Q8TAT6 608 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 SLC5A4Q9NY91 659 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 MTMR4Q9NYA4 1195 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 PPP1R9AQ9ULJ8 1098 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 SYNPO2Q9UMS6 1093 aa27.39■■□□□ 1.98
SSBP4-205ENST00000598159 TMEM132BQ14DG7 1078 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 CCDC129Q6ZRS4 1044 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 CHD1LQ86WJ1 897 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 NCAPG2Q86XI2 1143 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 FBXO28Q9NVF7 368 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 FLRT1Q9NZU1 646 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 NR2E3Q9Y5X4 410 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 PARP14Q460N5 1801 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 A0A0G2JMZ2 1700 aa27.38■■□□□ 1.97
SSBP4-205ENST00000598159 VWA5AO00534 786 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 TTLL1O95922 423 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 TSPY3P0CV98 308 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 TSPY8P0CW00 308 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 ADORA2AP29274 412 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 CEP95Q96GE4 821 aa27.37■■□□□ 1.97
SSBP4-205ENST00000598159 SUPT16HQ9Y5B9 1047 aaKnown RBP27.37■■□□□ 1.97
SSBP4-205ENST00000598159 TRIM6-TRIM34B2RNG4 842 aa27.36■■□□□ 1.97
SSBP4-205ENST00000598159 CCND3P30281 292 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-205ENST00000598159 TFAP4Q01664 338 aa27.36■■□□□ 1.97
SSBP4-205ENST00000598159 NUCB1Q02818 461 aa27.36■■□□□ 1.97
SSBP4-205ENST00000598159 MCMDC2Q4G0Z9 681 aa27.36■■□□□ 1.97
SSBP4-205ENST00000598159 NBPF3Q9H094 633 aa27.36■■□□□ 1.97
SSBP4-205ENST00000598159 FOXP2O15409 715 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 NDUFB10O96000 172 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 FCER1AP12319 257 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 STAT3P40763 770 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 ALX1Q15699 326 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 HABP4Q5JVS0 413 aaKnown RBP27.35■■□□□ 1.97
SSBP4-205ENST00000598159 OLFML2BQ68BL8 750 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 LHX8Q68G74 356 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 RIOX2Q8IUF8 465 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 PRPF38AQ8NAV1 312 aaKnown RBP27.35■■□□□ 1.97
SSBP4-205ENST00000598159 OSBPL3Q9H4L5 887 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 MYH4Q9Y623 1939 aa27.35■■□□□ 1.97
SSBP4-205ENST00000598159 IGHA2P01877 340 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 COPB2P35606 906 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 FAM47AQ5JRC9 791 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 PPP4R3BQ5MIZ7 849 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 DIS3LQ8TF46 1054 aaKnown RBP27.34■■□□□ 1.97
SSBP4-205ENST00000598159 RILPL2Q969X0 211 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 SLF1Q9BQI6 1058 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 ANAPC4Q9UJX5 808 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 PLIN4Q96Q06 1357 aa27.34■■□□□ 1.97
SSBP4-205ENST00000598159 ZNFX1Q9P2E3 1918 aaKnown RBP27.33■■□□□ 1.97
SSBP4-205ENST00000598159 COL11A1P12107 1806 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-205ENST00000598159 EVI5O60447 810 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 COBLO75128 1261 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 MNX1P50219 401 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-205ENST00000598159 VPS53Q5VIR6 699 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 PLEKHM2Q8IWE5 1019 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 GMCL1P1Q8NEA9 526 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 FAM227BQ96M60 508 aa27.33■■□□□ 1.97
SSBP4-205ENST00000598159 NUP88Q99567 741 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-205ENST00000598159 MSCO60682 206 aa27.32■■□□□ 1.96
SSBP4-205ENST00000598159 CTDSPL2Q05D32 466 aa27.32■■□□□ 1.96
SSBP4-205ENST00000598159 REPS2Q8NFH8 660 aa27.32■■□□□ 1.96
SSBP4-205ENST00000598159 C11orf49Q9H6J7 331 aa27.32■■□□□ 1.96
SSBP4-205ENST00000598159 ZNF214Q9UL59 606 aaPredicted RBP27.32■■□□□ 1.96
SSBP4-205ENST00000598159 ZNF236Q9UL36 1845 aa27.32■■□□□ 1.96
SSBP4-205ENST00000598159 CYP2C19P33261 490 aa27.31■■□□□ 1.96
SSBP4-205ENST00000598159 FEM1BQ9UK73 627 aa27.31■■□□□ 1.96
SSBP4-205ENST00000598159 COLQQ9Y215 455 aaPredicted RBP27.31■■□□□ 1.96
SSBP4-205ENST00000598159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.31■■□□□ 1.961e-6■■■□□ 16.2
SSBP4-205ENST00000598159 A0A0D9SFI3 127 aa27.3■■□□□ 1.96
SSBP4-205ENST00000598159 TSPY2A6NKD2 308 aa27.3■■□□□ 1.96
SSBP4-205ENST00000598159 CNGA1P29973 690 aa27.3■■□□□ 1.96
SSBP4-205ENST00000598159 MMP19Q99542 508 aa27.3■■□□□ 1.96
SSBP4-205ENST00000598159 ZBED4O75132 1171 aa27.29■■□□□ 1.96
SSBP4-205ENST00000598159 FGAP02671 866 aa27.29■■□□□ 1.96
SSBP4-205ENST00000598159 HSPD1P10809 573 aaKnown RBP27.29■■□□□ 1.96
SSBP4-205ENST00000598159 NMIQ13287 307 aaPredicted RBP27.29■■□□□ 1.96
SSBP4-205ENST00000598159 SLFN13Q68D06 897 aa27.29■■□□□ 1.96
SSBP4-205ENST00000598159 DDX20Q9UHI6 824 aaKnown RBP27.29■■□□□ 1.96
SSBP4-205ENST00000598159 ATP2A1O14983 1001 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 FGRP09769 529 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 SDSP20132 328 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 MFAP1P55081 439 aaKnown RBP27.28■■□□□ 1.96
SSBP4-205ENST00000598159 KCTD2Q14681 263 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 LRRC47Q8N1G4 583 aaKnown RBP27.28■■□□□ 1.96
SSBP4-205ENST00000598159 TEX13BQ9BXU2 312 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 INCENPQ9NQS7 918 aa27.28■■□□□ 1.96
SSBP4-205ENST00000598159 DIS3Q9Y2L1 958 aaKnown RBP27.28■■□□□ 1.96
SSBP4-205ENST00000598159 CTDP1Q9Y5B0 961 aaPredicted RBP27.28■■□□□ 1.96
SSBP4-205ENST00000598159 ORC4O43929 436 aa27.27■■□□□ 1.96
SSBP4-205ENST00000598159 BMP3P12645 472 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms