RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SMC5Q8IY18 1101 aa27.97■■■□□ 2.07
LSM4-204ENST00000594828 NPLOC4Q8TAT6 608 aa27.97■■■□□ 2.07
LSM4-204ENST00000594828 DIS3LQ8TF46 1054 aaKnown RBP27.97■■■□□ 2.07
LSM4-204ENST00000594828 CLIP2Q9UDT6 1046 aa27.97■■■□□ 2.07
LSM4-204ENST00000594828 NR2E3Q9Y5X4 410 aa27.97■■■□□ 2.07
LSM4-204ENST00000594828 IGKV6D-41A0A0C4DH26 115 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 F5H6K3 240 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 ADORA2AP29274 412 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 KLRC3Q07444 240 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 PPARAQ07869 468 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 TMEM132BQ14DG7 1078 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 EXOC6Q8TAG9 804 aa27.96■■■□□ 2.07
LSM4-204ENST00000594828 GREB1LQ9C091 1923 aaPredicted RBP27.96■■■□□ 2.07
LSM4-204ENST00000594828 A0A0G2JMZ2 1700 aa27.95■■■□□ 2.07
LSM4-204ENST00000594828 NBPF3Q9H094 633 aa27.95■■■□□ 2.06
LSM4-204ENST00000594828 PPP1R9AQ9ULJ8 1098 aa27.95■■■□□ 2.06
LSM4-204ENST00000594828 COLQQ9Y215 455 aaPredicted RBP27.95■■■□□ 2.06
LSM4-204ENST00000594828 VWA5AO00534 786 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 EVI5O60447 810 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 SLC25A27O95847 323 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 MKL1Q969V6 931 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 CEP95Q96GE4 821 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 NUP88Q99567 741 aaPredicted RBP27.94■■■□□ 2.06
LSM4-204ENST00000594828 HELLSQ9NRZ9 838 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 MTMR4Q9NYA4 1195 aa27.94■■■□□ 2.06
LSM4-204ENST00000594828 NDUFB10O96000 172 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 IGHDP01880 384 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 TSPY3P0CV98 308 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 TSPY8P0CW00 308 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 MNX1P50219 401 aaPredicted RBP27.93■■■□□ 2.06
LSM4-204ENST00000594828 LHX8Q68G74 356 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 ABRAQ8N0Z2 381 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 NEDD1Q8NHV4 660 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 SLC5A4Q9NY91 659 aa27.93■■■□□ 2.06
LSM4-204ENST00000594828 FOXP2O15409 715 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 TTLL1O95922 423 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 CYP2C19P33261 490 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 TFAP4Q01664 338 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 FAM47AQ5JRC9 791 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 TICAM2Q86XR7 235 aa27.92■■■□□ 2.06
LSM4-204ENST00000594828 PARP14Q460N5 1801 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 TRIM6-TRIM34B2RNG4 842 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 COBLO75128 1261 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 FCER1AP12319 257 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 STAT3P40763 770 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 OLFML2BQ68BL8 750 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 CHD1LQ86WJ1 897 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 RIOX2Q8IUF8 465 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 SLF1Q9BQI6 1058 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 C11orf49Q9H6J7 331 aa27.91■■■□□ 2.06
LSM4-204ENST00000594828 CNGA1P29973 690 aa27.9■■■□□ 2.06
LSM4-204ENST00000594828 VPS53Q5VIR6 699 aa27.9■■■□□ 2.06
LSM4-204ENST00000594828 SYNPO2Q9UMS6 1093 aa27.9■■■□□ 2.06
LSM4-204ENST00000594828 IGHA2P01877 340 aa27.89■■■□□ 2.06
LSM4-204ENST00000594828 CTDSPL2Q05D32 466 aa27.89■■■□□ 2.06
LSM4-204ENST00000594828 MCMDC2Q4G0Z9 681 aa27.89■■■□□ 2.06
LSM4-204ENST00000594828 PRPF38AQ8NAV1 312 aaKnown RBP27.89■■■□□ 2.06
LSM4-204ENST00000594828 REPS2Q8NFH8 660 aa27.89■■■□□ 2.06
LSM4-204ENST00000594828 FAM227BQ96M60 508 aa27.89■■■□□ 2.06
LSM4-204ENST00000594828 ZNF214Q9UL59 606 aaPredicted RBP27.89■■■□□ 2.06
LSM4-204ENST00000594828 SUPT16HQ9Y5B9 1047 aaKnown RBP27.89■■■□□ 2.06
LSM4-204ENST00000594828 PLIN4Q96Q06 1357 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 NUCB1Q02818 461 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 CHRDL2Q6WN34 429 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 LRRC47Q8N1G4 583 aaKnown RBP27.88■■■□□ 2.05
LSM4-204ENST00000594828 RILPL2Q969X0 211 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 MMP19Q99542 508 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 ZNF236Q9UL36 1845 aa27.88■■■□□ 2.05
LSM4-204ENST00000594828 A0A0D9SFI3 127 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 MSCO60682 206 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 COPB2P35606 906 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 ALX1Q15699 326 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 GMCL1P1Q8NEA9 526 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 INCENPQ9NQS7 918 aa27.87■■■□□ 2.05
LSM4-204ENST00000594828 DDX20Q9UHI6 824 aaKnown RBP27.87■■■□□ 2.05
LSM4-204ENST00000594828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.87■■■□□ 2.05
LSM4-204ENST00000594828 COL11A1P12107 1806 aaPredicted RBP27.86■■■□□ 2.05
LSM4-204ENST00000594828 KCTD2Q14681 263 aa27.86■■■□□ 2.05
LSM4-204ENST00000594828 PLEKHM2Q8IWE5 1019 aa27.86■■■□□ 2.05
LSM4-204ENST00000594828 TRPV1Q8NER1 839 aa27.86■■■□□ 2.05
LSM4-204ENST00000594828 ANAPC4Q9UJX5 808 aa27.86■■■□□ 2.05
LSM4-204ENST00000594828 MYH4Q9Y623 1939 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 TSPY2A6NKD2 308 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 CYBAP13498 195 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 NMIQ13287 307 aaPredicted RBP27.85■■■□□ 2.05
LSM4-204ENST00000594828 PPP4R3BQ5MIZ7 849 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 SLFN13Q68D06 897 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 MAML3Q96JK9 1138 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 TEX13BQ9BXU2 312 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 OSBPL3Q9H4L5 887 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 FEM1BQ9UK73 627 aa27.85■■■□□ 2.05
LSM4-204ENST00000594828 CTDP1Q9Y5B0 961 aaPredicted RBP27.85■■■□□ 2.05
LSM4-204ENST00000594828 ZBED4O75132 1171 aa27.84■■■□□ 2.05
LSM4-204ENST00000594828 FGAP02671 866 aa27.84■■■□□ 2.05
LSM4-204ENST00000594828 KIFC2Q96AC6 838 aa27.84■■■□□ 2.05
LSM4-204ENST00000594828 PGK2P07205 417 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 COL6A1P12109 1028 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 BMP3P12645 472 aa27.83■■■□□ 2.05
LSM4-204ENST00000594828 SNRNP48Q6IEG0 339 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms