RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 RAD21O60216 631 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 COBLO75128 1261 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 SLC25A27O95847 323 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 TMEM132BQ14DG7 1078 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 LRRC26Q2I0M4 334 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 OSBP2Q969R2 916 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 ADAMTS5Q9UNA0 930 aa19.37■□□□□ 0.69
CAPN12-203ENST00000594497 MINDY4BA8MYZ0 360 aa19.36■□□□□ 0.69
CAPN12-203ENST00000594497 FCER1AP12319 257 aa19.36■□□□□ 0.69
CAPN12-203ENST00000594497 MAGEA10P43363 369 aaPredicted RBP19.36■□□□□ 0.69
CAPN12-203ENST00000594497 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.36■□□□□ 0.69
CAPN12-203ENST00000594497 MKNK2Q9HBH9 465 aa19.36■□□□□ 0.69
CAPN12-203ENST00000594497 DNM1LO00429 736 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 SOX1O00570 391 aaPredicted RBP19.35■□□□□ 0.69
CAPN12-203ENST00000594497 GPAA1O43292 621 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 GNAT2P19087 354 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 RASA1P20936 1047 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
CAPN12-203ENST00000594497 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 STK11IPQ8N1F8 1099 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 SENP6Q9GZR1 1112 aaPredicted RBP19.35■□□□□ 0.69
CAPN12-203ENST00000594497 FBXO28Q9NVF7 368 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 PPP1R9AQ9ULJ8 1098 aa19.35■□□□□ 0.69
CAPN12-203ENST00000594497 TTC41PQ6P2S7 1318 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 VWA5AO00534 786 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 SEPT4O43236 478 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 RIOX2Q8IUF8 465 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 MAML3Q96JK9 1138 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
CAPN12-203ENST00000594497 M0R2C6 588 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 ERC2O15083 957 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 APPP05067 770 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 TDO2P48775 406 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 TDHQ8IZJ6 230 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 ARRDC4Q8NCT1 418 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 LRCH3Q96II8 777 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 MMP19Q99542 508 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 UBE2OQ9C0C9 1292 aaKnown RBP19.33■□□□□ 0.68
CAPN12-203ENST00000594497 ZNF287Q9HBT7 754 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
CAPN12-203ENST00000594497 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.68
CAPN12-203ENST00000594497 COPB2P35606 906 aa19.32■□□□□ 0.68
CAPN12-203ENST00000594497 STAT3P40763 770 aa19.32■□□□□ 0.68
CAPN12-203ENST00000594497 ZNF214Q9UL59 606 aaPredicted RBP19.32■□□□□ 0.68
CAPN12-203ENST00000594497 COL6A3P12111 3177 aa19.32■□□□□ 0.68
CAPN12-203ENST00000594497 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
CAPN12-203ENST00000594497 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 KCTD2Q14681 263 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 PRAMEF19Q5SWL8 479 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 GJC2Q5T442 439 aaPredicted RBP19.31■□□□□ 0.68
CAPN12-203ENST00000594497 ANO1Q5XXA6 986 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
CAPN12-203ENST00000594497 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
CAPN12-203ENST00000594497 SLF1Q9BQI6 1058 aa19.31■□□□□ 0.68
CAPN12-203ENST00000594497 LAMA2P24043 3122 aaKnown RBP19.31■□□□□ 0.68
CAPN12-203ENST00000594497 PATL2C9JE40 543 aaKnown RBP19.3■□□□□ 0.68
CAPN12-203ENST00000594497 F5H6K3 240 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
CAPN12-203ENST00000594497 KLRC3Q07444 240 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 NACAP1Q9BZK3 213 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 NRBP1Q9UHY1 535 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 DIS3Q9Y2L1 958 aaKnown RBP19.3■□□□□ 0.68
CAPN12-203ENST00000594497 LTBP2Q14767 1821 aa19.3■□□□□ 0.68
CAPN12-203ENST00000594497 IGKV6D-41A0A0C4DH26 115 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 PRDM1O75626 825 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 NDUFB10O96000 172 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 PGK2P07205 417 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
CAPN12-203ENST00000594497 LRIT3Q3SXY7 679 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 IFNL3Q8IZI9 196 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 OTUD7AQ8TE49 926 aaPredicted RBP19.29■□□□□ 0.68
CAPN12-203ENST00000594497 SEC62Q99442 399 aaKnown RBP19.29■□□□□ 0.68
CAPN12-203ENST00000594497 TEX13BQ9BXU2 312 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
CAPN12-203ENST00000594497 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
CAPN12-203ENST00000594497 MX1P20591 662 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 RTP1P59025 263 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 ZNF792Q3KQV3 632 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 GPR153Q6NV75 609 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
CAPN12-203ENST00000594497 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
CAPN12-203ENST00000594497 TTLL1O95922 423 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 RRP1P56182 461 aaKnown RBP19.27■□□□□ 0.68
CAPN12-203ENST00000594497 PDE4BQ07343 736 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 ZMYM1Q5SVZ6 1142 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
CAPN12-203ENST00000594497 MKL1Q969V6 931 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 LBHD1Q9BQE6 289 aaPredicted RBP19.27■□□□□ 0.68
CAPN12-203ENST00000594497 NAPBQ9H115 298 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 MTMR4Q9NYA4 1195 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 PRKAG2Q9UGJ0 569 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 PLIN4Q96Q06 1357 aa19.27■□□□□ 0.68
CAPN12-203ENST00000594497 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
CAPN12-203ENST00000594497 TSPY3P0CV98 308 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms