RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 FCER1AP12319 257 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 PLS1Q14651 629 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 SBK1Q52WX2 424 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 STRBPQ96SI9 672 aaKnown RBP18.43■□□□□ 0.54
APOC4-201ENST00000591600 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 GOPCQ9HD26 462 aa18.43■□□□□ 0.54
APOC4-201ENST00000591600 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 SMARCA5O60264 1052 aaPredicted RBP18.42■□□□□ 0.54
APOC4-201ENST00000591600 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 RIOX2Q8IUF8 465 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 KBTBD3Q8NAB2 608 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 MAML3Q96JK9 1138 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.42■□□□□ 0.54
APOC4-201ENST00000591600 COL6A3P12111 3177 aa18.42■□□□□ 0.54
APOC4-201ENST00000591600 GSG1L2A8MUP6 293 aa18.41■□□□□ 0.54
APOC4-201ENST00000591600 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
APOC4-201ENST00000591600 PPP1R9AQ9ULJ8 1098 aa18.41■□□□□ 0.54
APOC4-201ENST00000591600 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
APOC4-201ENST00000591600 ROBO3Q96MS0 1386 aa18.41■□□□□ 0.54
APOC4-201ENST00000591600 VWA5AO00534 786 aa18.4■□□□□ 0.54
APOC4-201ENST00000591600 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
APOC4-201ENST00000591600 COPB2P35606 906 aa18.4■□□□□ 0.54
APOC4-201ENST00000591600 APPBP2Q92624 585 aa18.4■□□□□ 0.54
APOC4-201ENST00000591600 RASA1P20936 1047 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 STAT3P40763 770 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 GJC2Q5T442 439 aaPredicted RBP18.39■□□□□ 0.53
APOC4-201ENST00000591600 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 GPATCH3Q96I76 525 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 FBXO28Q9NVF7 368 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
APOC4-201ENST00000591600 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
APOC4-201ENST00000591600 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 RNF113AO15541 343 aaKnown RBP18.38■□□□□ 0.53
APOC4-201ENST00000591600 GNAT2P19087 354 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 MDM2Q00987 491 aaPredicted RBP18.38■□□□□ 0.53
APOC4-201ENST00000591600 SNX17Q15036 470 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 C1orf53Q5VUE5 145 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 SLC39A5Q6ZMH5 540 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 OSBP2Q969R2 916 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 MMP19Q99542 508 aa18.38■□□□□ 0.53
APOC4-201ENST00000591600 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
APOC4-201ENST00000591600 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
APOC4-201ENST00000591600 RTP1P59025 263 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 KCTD2Q14681 263 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 PRAMEF19Q5SWL8 479 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 DEFB123Q8N688 67 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 PRKAG2Q9UGJ0 569 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 SYNPO2Q9UMS6 1093 aa18.37■□□□□ 0.53
APOC4-201ENST00000591600 F5H6K3 240 aa18.36■□□□□ 0.53
APOC4-201ENST00000591600 KLRC3Q07444 240 aa18.36■□□□□ 0.53
APOC4-201ENST00000591600 LRRC41Q15345 812 aa18.36■□□□□ 0.53
APOC4-201ENST00000591600 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
APOC4-201ENST00000591600 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
APOC4-201ENST00000591600 MKL1Q969V6 931 aa18.36■□□□□ 0.53
APOC4-201ENST00000591600 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
APOC4-201ENST00000591600 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 ATP2A1O14983 1001 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 GPAA1O43292 621 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 ANO1Q5XXA6 986 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 MSL3Q8N5Y2 521 aaKnown RBP18.35■□□□□ 0.53
APOC4-201ENST00000591600 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
APOC4-201ENST00000591600 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 MTMR10Q9NXD2 777 aa18.35■□□□□ 0.53
APOC4-201ENST00000591600 PATL2C9JE40 543 aaKnown RBP18.34■□□□□ 0.53
APOC4-201ENST00000591600 PGK2P07205 417 aa18.34■□□□□ 0.53
APOC4-201ENST00000591600 FAM47AQ5JRC9 791 aa18.34■□□□□ 0.53
APOC4-201ENST00000591600 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
APOC4-201ENST00000591600 SLC17A8Q8NDX2 589 aa18.34■□□□□ 0.53
APOC4-201ENST00000591600 EPB41L4AQ9HCS5 686 aaPredicted RBP18.34■□□□□ 0.53
APOC4-201ENST00000591600 PHF24Q9UPV7 400 aa18.34■□□□□ 0.53
APOC4-201ENST00000591600 STXBP5LQ9Y2K9 1186 aa18.34■□□□□ 0.53
APOC4-201ENST00000591600 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 RAD21O60216 631 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 NDUFB10O96000 172 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 RARBP10826 455 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 ADCYAP1R1P41586 468 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
APOC4-201ENST00000591600 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.52
APOC4-201ENST00000591600 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 ATP11BQ9Y2G3 1177 aa18.33■□□□□ 0.52
APOC4-201ENST00000591600 MCM3APO60318 1980 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 DNAJC25-GNG10A0A024R161 153 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 ERC2O15083 957 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 ZNF865P0CJ78 1059 aaPredicted RBP18.32■□□□□ 0.52
APOC4-201ENST00000591600 AKR1A1P14550 325 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 TDO2P48775 406 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 MAMDC4Q6UXC1 1216 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 Q7L0L9 218 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 RNF180Q86T96 592 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 IFNL3Q8IZI9 196 aa18.32■□□□□ 0.52
APOC4-201ENST00000591600 NUP88Q99567 741 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms