RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 FLOT1O75955 427 aa21.43■■□□□ 1.02
VAT1-208ENST00000590924 IGHA2P01877 340 aa21.43■■□□□ 1.02
VAT1-208ENST00000590924 COL6A1P12109 1028 aa21.43■■□□□ 1.02
VAT1-208ENST00000590924 SPICE1Q8N0Z3 855 aa21.43■■□□□ 1.02
VAT1-208ENST00000590924 STRBPQ96SI9 672 aaKnown RBP21.43■■□□□ 1.02
VAT1-208ENST00000590924 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
VAT1-208ENST00000590924 ATP2B2Q01814 1243 aa21.42■■□□□ 1.02
VAT1-208ENST00000590924 LAMA3Q16787 3333 aa21.42■■□□□ 1.02
VAT1-208ENST00000590924 TTC22Q5TAA0 569 aa21.42■■□□□ 1.02
VAT1-208ENST00000590924 ROBO3Q96MS0 1386 aa21.42■■□□□ 1.02
VAT1-208ENST00000590924 TRIM6-TRIM34B2RNG4 842 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 MSCO60682 206 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
VAT1-208ENST00000590924 ERCC3P19447 782 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 ADORA2AP29274 412 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 SBK1Q52WX2 424 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 APPBP2Q92624 585 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 ATG4CQ96DT6 458 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 GDF15Q99988 308 aa21.41■■□□□ 1.02
VAT1-208ENST00000590924 GSG1L2A8MUP6 293 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 RNF113AO15541 343 aaKnown RBP21.4■■□□□ 1.02
VAT1-208ENST00000590924 BMP8BP34820 402 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 OLFML2BQ68BL8 750 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 DPP9Q86TI2 863 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 ABRAQ8N0Z2 381 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 OSBP2Q969R2 916 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 MROH8Q9H579 483 aa21.4■■□□□ 1.02
VAT1-208ENST00000590924 DDX20Q9UHI6 824 aaKnown RBP21.4■■□□□ 1.02
VAT1-208ENST00000590924 DNAH12Q6ZR08 3092 aa21.39■■□□□ 1.01
VAT1-208ENST00000590924 CYBAP13498 195 aa21.39■■□□□ 1.01
VAT1-208ENST00000590924 CYP2C19P33261 490 aa21.39■■□□□ 1.01
VAT1-208ENST00000590924 GOPCQ9HD26 462 aa21.39■■□□□ 1.01
VAT1-208ENST00000590924 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
VAT1-208ENST00000590924 ADAMTS5Q9UNA0 930 aa21.39■■□□□ 1.01
VAT1-208ENST00000590924 PLS1Q14651 629 aa21.38■■□□□ 1.01
VAT1-208ENST00000590924 TRPV1Q8NER1 839 aa21.38■■□□□ 1.01
VAT1-208ENST00000590924 RILPL2Q969X0 211 aa21.38■■□□□ 1.01
VAT1-208ENST00000590924 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.38■■□□□ 1.01
VAT1-208ENST00000590924 LTBP2Q14767 1821 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 GPAA1O43292 621 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 COBLO75128 1261 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 GSPT1P15170 499 aaKnown RBP21.37■■□□□ 1.01
VAT1-208ENST00000590924 RASA1P20936 1047 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 CNGA1P29973 690 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 TMEM132BQ14DG7 1078 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 NCAPG2Q86XI2 1143 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 SLC5A4Q9NY91 659 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 MCM3APO60318 1980 aa21.37■■□□□ 1.01
VAT1-208ENST00000590924 HIP1O00291 1037 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 SLC25A27O95847 323 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 SYN1P17600 705 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 GNAT2P19087 354 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 LRRC26Q2I0M4 334 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 EPB41L4AQ9HCS5 686 aaPredicted RBP21.36■■□□□ 1.01
VAT1-208ENST00000590924 FBXO28Q9NVF7 368 aa21.36■■□□□ 1.01
VAT1-208ENST00000590924 DNM1LO00429 736 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 FCER1AP12319 257 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 SDSP20132 328 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 BMP2KLQ5H9B9 411 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 SAMD1Q6SPF0 538 aaPredicted RBP21.35■■□□□ 1.01
VAT1-208ENST00000590924 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 NYAP2Q9P242 653 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 PPP1R9AQ9ULJ8 1098 aa21.35■■□□□ 1.01
VAT1-208ENST00000590924 MINDY4BA8MYZ0 360 aa21.34■■□□□ 1.01
VAT1-208ENST00000590924 MAGEA10P43363 369 aaPredicted RBP21.34■■□□□ 1.01
VAT1-208ENST00000590924 ZMYM1Q5SVZ6 1142 aa21.34■■□□□ 1.01
VAT1-208ENST00000590924 FAM83BQ5T0W9 1011 aa21.34■■□□□ 1.01
VAT1-208ENST00000590924 RIOX2Q8IUF8 465 aa21.34■■□□□ 1.01
VAT1-208ENST00000590924 ZNF214Q9UL59 606 aaPredicted RBP21.34■■□□□ 1.01
VAT1-208ENST00000590924 M0R2C6 588 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 VWA5AO00534 786 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 SEPT4O43236 478 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 TDO2P48775 406 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 MAML3Q96JK9 1138 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 SENP6Q9GZR1 1112 aaPredicted RBP21.33■■□□□ 1.01
VAT1-208ENST00000590924 HELLSQ9NRZ9 838 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 GTF3C3Q9Y5Q9 886 aa21.33■■□□□ 1.01
VAT1-208ENST00000590924 SOX1O00570 391 aaPredicted RBP21.32■■□□□ 1
VAT1-208ENST00000590924 COPB2P35606 906 aa21.32■■□□□ 1
VAT1-208ENST00000590924 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
VAT1-208ENST00000590924 REPS2Q8NFH8 660 aa21.32■■□□□ 1
VAT1-208ENST00000590924 ZNF287Q9HBT7 754 aa21.32■■□□□ 1
VAT1-208ENST00000590924 IGKV6D-41A0A0C4DH26 115 aa21.31■■□□□ 1
VAT1-208ENST00000590924 PATL2C9JE40 543 aaKnown RBP21.31■■□□□ 1
VAT1-208ENST00000590924 RAD21O60216 631 aa21.31■■□□□ 1
VAT1-208ENST00000590924 STAT3P40763 770 aa21.31■■□□□ 1
VAT1-208ENST00000590924 SKAP1Q86WV1 359 aa21.31■■□□□ 1
VAT1-208ENST00000590924 ARRDC4Q8NCT1 418 aa21.31■■□□□ 1
VAT1-208ENST00000590924 MMP19Q99542 508 aa21.31■■□□□ 1
VAT1-208ENST00000590924 PLIN4Q96Q06 1357 aa21.31■■□□□ 1
VAT1-208ENST00000590924 NDUFB10O96000 172 aa21.3■■□□□ 1
VAT1-208ENST00000590924 APPP05067 770 aa21.3■■□□□ 1
VAT1-208ENST00000590924 IFNL3Q8IZI9 196 aa21.3■■□□□ 1
VAT1-208ENST00000590924 TDHQ8IZJ6 230 aa21.3■■□□□ 1
VAT1-208ENST00000590924 LRCH3Q96II8 777 aa21.3■■□□□ 1
VAT1-208ENST00000590924 SLF1Q9BQI6 1058 aa21.3■■□□□ 1
VAT1-208ENST00000590924 NRBP1Q9UHY1 535 aa21.3■■□□□ 1
VAT1-208ENST00000590924 SYNPO2Q9UMS6 1093 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms