RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 LCA5LO95447 670 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 VAV2P52735 878 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 FANCCQ00597 558 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 ANKRD1Q15327 319 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 KAZNQ674X7 775 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 TMEM53Q6P2H8 277 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 MIER3Q7Z3K6 550 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 DDX23Q9BUQ8 820 aaKnown RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC113Q9H0I3 377 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 RMND1Q9NWS8 449 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 HDLBPQ00341 1268 aaKnown RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CEP70Q8NHQ1 597 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 KLHL29Q96CT2 875 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 DUSP9Q99956 384 aaKnown RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC68Q9H2F9 335 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CIDEBQ9UHD4 219 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 TMEM247A6NEH6 219 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CHGBP05060 677 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 GSTT1P30711 240 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 COPB2P35606 906 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 STAT6P42226 847 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 NSUN2Q08J23 767 aaKnown RBP eCLIP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC153Q494R4 210 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 C11orf57Q6ZUT1 292 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CNBD1Q8NA66 436 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 RAB3IPQ96QF0 476 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 OPLAHO14841 1288 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 FAM107AO95990 144 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 APOEP02649 317 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 ELF3P78545 371 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 GUCY1A3Q02108 690 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 APBA1Q02410 837 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 PTGISQ16647 500 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 ARMCX5Q6P1M9 558 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 KLC3Q6P597 504 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 GFM2Q969S9 779 aaKnown RBP8.59□□□□□ -1.03
LAMA3-210ENST00000588770 FSD1Q9BTV5 496 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 ANKZF1Q9H8Y5 726 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 PALMDQ9NP74 551 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 PALM3A6NDB9 673 aaPredicted RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 PDE5AO76074 875 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 MYL6BP14649 208 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 HOXD12P35452 270 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ZNF131P52739 623 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 CYLC2Q14093 348 aaPredicted RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ALDH1L2Q3SY69 923 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 FAM133BQ5BKY9 247 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ALS2CLQ60I27 953 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 MYO1HQ8N1T3 1032 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 FAM133AQ8N9E0 248 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 RSPH1Q8WYR4 309 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 EURLQ9NYK6 297 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SERPINB3P29508 390 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 BASP1P80723 227 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 USH1GQ495M9 461 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD20A2Q5SQ80 823 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD20A1Q5TYW2 823 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD20A3Q5VUR7 823 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 NEK10Q6ZWH5 1172 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SESTD1Q86VW0 696 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 DHTKD1Q96HY7 919 aaPredicted RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SCAF11Q99590 1463 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 DESI2Q9BSY9 194 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ANKRD30BQ9BXX2 1392 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ABCA5Q8WWZ7 1642 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 IGF1RP08069 1367 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ZNF521Q96K83 1311 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 GMNCA6NCL1 334 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 S100BP04271 92 aaPredicted RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 HSPA1AP0DMV8 641 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 HSPA1BP0DMV9 641 aaKnown RBP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 RFC5P40937 340 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 CETN2P41208 172 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 VPS41P49754 854 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 FLIIQ13045 1269 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 FKBP15Q5T1M5 1219 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SLC43A3Q8NBI5 491 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SLC7A5P2Q9GIP4 190 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 GGNBP2Q9H3C7 697 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.58□□□□□ -1.04
LAMA3-210ENST00000588770 PFKFB2O60825 505 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 ZMYND10O75800 440 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 UPP2O95045 317 aa8.58□□□□□ -1.04
LAMA3-210ENST00000588770 SYF2O95926 243 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms