RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 DIXDC1Q155Q3 683 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 TRIM6Q9C030 488 aaPredicted RBP17.27■□□□□ 0.36
PTPRS-206ENST00000588552 SERPINB13Q9UIV8 391 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
PTPRS-206ENST00000588552 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■□□ 18.2
PTPRS-206ENST00000588552 PKP1Q13835 747 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
PTPRS-206ENST00000588552 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.35
PTPRS-206ENST00000588552 CMA1P23946 247 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 CCPG1Q9ULG6 757 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 NR1I2O75469 434 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTPRS-206ENST00000588552 RNF26Q9BY78 433 aaPredicted RBP17.26■□□□□ 0.35
PTPRS-206ENST00000588552 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 ANKRD35Q8N283 1001 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
PTPRS-206ENST00000588552 FMNL1O95466 1100 aaPredicted RBP17.26■□□□□ 0.35
PTPRS-206ENST00000588552 AMNQ9BXJ7 453 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 COA1Q9GZY4 146 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
PTPRS-206ENST00000588552 USP17L8P0C7I0 530 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 MCAMP43121 646 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■□□□ 13.7
PTPRS-206ENST00000588552 V9GYY5 206 aaPredicted RBP17.25■□□□□ 0.35
PTPRS-206ENST00000588552 TSNARE1Q96NA8 513 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
PTPRS-206ENST00000588552 KANSL2Q9H9L4 492 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 GDF11O95390 407 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
PTPRS-206ENST00000588552 USP17L3A6NCW0 530 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 USP17L4A6NCW7 530 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 PTGDRQ13258 359 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 TAF12Q16514 161 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 USP17L1Q7RTZ2 530 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
PTPRS-206ENST00000588552 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.25■□□□□ 0.35
PTPRS-206ENST00000588552 CLIC6Q96NY7 704 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
PTPRS-206ENST00000588552 TUBB4BP68371 445 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 KCTD1Q719H9 257 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 NCAPG2Q86XI2 1143 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 NSUN7Q8NE18 718 aaKnown RBP17.24■□□□□ 0.35
PTPRS-206ENST00000588552 IMPACTQ9P2X3 320 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 SLC8A3P57103 927 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 MTX1Q13505 466 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 SLC9C1Q4G0N8 1177 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 CCDC77Q9BR77 488 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
PTPRS-206ENST00000588552 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
PTPRS-206ENST00000588552 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 TEKT3Q9BXF9 490 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 KRT9P35527 623 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 MCM6Q14566 821 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 SEL1L2Q5TEA6 688 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 ADRA2BP18089 450 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 FOXP1Q9H334 677 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 RIMBP3CA6NJZ7 1639 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 RIMBP3BA6NNM3 1639 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 RIMBP3Q9UFD9 1639 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 SPOPO43791 374 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 TNNC1P63316 161 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 ZSWIM5Q9P217 1185 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 PCDHA4Q9UN74 947 aa17.23■□□□□ 0.35
PTPRS-206ENST00000588552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
PTPRS-206ENST00000588552 KCNQ2O43526 872 aa17.22■□□□□ 0.35
PTPRS-206ENST00000588552 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
PTPRS-206ENST00000588552 KRT26Q7Z3Y9 468 aa17.22■□□□□ 0.35
PTPRS-206ENST00000588552 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
PTPRS-206ENST00000588552 MYOCDQ8IZQ8 938 aa17.22■□□□□ 0.35
PTPRS-206ENST00000588552 ARHGEF1Q92888 912 aaKnown RBP17.22■□□□□ 0.35
PTPRS-206ENST00000588552 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms