RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 DNAH12Q6ZR08 3092 aa20.19■□□□□ 0.82
LINC01842-201ENST00000588275 PRAMEF19Q5SWL8 479 aa20.19■□□□□ 0.82
LINC01842-201ENST00000588275 ARRDC4Q8NCT1 418 aa20.19■□□□□ 0.82
LINC01842-201ENST00000588275 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
LINC01842-201ENST00000588275 SEPT4O43236 478 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 FCER1AP12319 257 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 TMEM132BQ14DG7 1078 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 GPR153Q6NV75 609 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 KANSL2Q9H9L4 492 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 GOPCQ9HD26 462 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 COL6A3P12111 3177 aa20.18■□□□□ 0.82
LINC01842-201ENST00000588275 ZNFX1Q9P2E3 1918 aaKnown RBP20.17■□□□□ 0.82
LINC01842-201ENST00000588275 IGHA2P01877 340 aa20.17■□□□□ 0.82
LINC01842-201ENST00000588275 FAM83BQ5T0W9 1011 aa20.17■□□□□ 0.82
LINC01842-201ENST00000588275 ABRAQ8N0Z2 381 aa20.17■□□□□ 0.82
LINC01842-201ENST00000588275 MMP19Q99542 508 aa20.17■□□□□ 0.82
LINC01842-201ENST00000588275 PRDM5Q9NQX1 630 aaPredicted RBP20.17■□□□□ 0.82
LINC01842-201ENST00000588275 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
LINC01842-201ENST00000588275 SLC25A27O95847 323 aa20.16■□□□□ 0.82
LINC01842-201ENST00000588275 PGK2P07205 417 aa20.16■□□□□ 0.82
LINC01842-201ENST00000588275 KCTD2Q14681 263 aa20.15■□□□□ 0.82
LINC01842-201ENST00000588275 FAM47AQ5JRC9 791 aa20.15■□□□□ 0.82
LINC01842-201ENST00000588275 FERMT2Q96AC1 680 aa20.15■□□□□ 0.82
LINC01842-201ENST00000588275 ECHDC1Q9NTX5 307 aa20.15■□□□□ 0.82
LINC01842-201ENST00000588275 PLXNA1Q9UIW2 1896 aa20.15■□□□□ 0.82
LINC01842-201ENST00000588275 LTBP2Q14767 1821 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 DLL1O00548 723 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 STAT3P40763 770 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 ADCYAP1R1P41586 468 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 SLC39A5Q6ZMH5 540 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 RIOX2Q8IUF8 465 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 NUP88Q99567 741 aaPredicted RBP20.14■□□□□ 0.81
LINC01842-201ENST00000588275 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 MTMR10Q9NXD2 777 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 PPP1R9AQ9ULJ8 1098 aa20.14■□□□□ 0.81
LINC01842-201ENST00000588275 VWA5AO00534 786 aa20.13■□□□□ 0.81
LINC01842-201ENST00000588275 LRRC41Q15345 812 aa20.13■□□□□ 0.81
LINC01842-201ENST00000588275 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
LINC01842-201ENST00000588275 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
LINC01842-201ENST00000588275 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
LINC01842-201ENST00000588275 GREB1LQ9C091 1923 aaPredicted RBP20.12■□□□□ 0.81
LINC01842-201ENST00000588275 RARBP10826 455 aa20.12■□□□□ 0.81
LINC01842-201ENST00000588275 SLC4A3P48751 1232 aa20.12■□□□□ 0.81
LINC01842-201ENST00000588275 XPNPEP3Q9NQH7 507 aa20.12■□□□□ 0.81
LINC01842-201ENST00000588275 ADAMTS5Q9UNA0 930 aa20.12■□□□□ 0.81
LINC01842-201ENST00000588275 SMCHD1A6NHR9 2005 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 RASA1P20936 1047 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 TDO2P48775 406 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 KBTBD3Q8NAB2 608 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 SLF1Q9BQI6 1058 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 TINF2Q9BSI4 451 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.11■□□□□ 0.81
LINC01842-201ENST00000588275 ZNF214Q9UL59 606 aaPredicted RBP20.11■□□□□ 0.81
LINC01842-201ENST00000588275 STXBP5LQ9Y2K9 1186 aa20.11■□□□□ 0.81
LINC01842-201ENST00000588275 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 APPP05067 770 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 TAL1P17542 331 aaPredicted RBP20.1■□□□□ 0.81
LINC01842-201ENST00000588275 COPB2P35606 906 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 SBK1Q52WX2 424 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
LINC01842-201ENST00000588275 APPBP2Q92624 585 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 OSBP2Q969R2 916 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 CTDP1Q9Y5B0 961 aaPredicted RBP20.1■□□□□ 0.81
LINC01842-201ENST00000588275 MYH4Q9Y623 1939 aa20.1■□□□□ 0.81
LINC01842-201ENST00000588275 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
LINC01842-201ENST00000588275 GPAA1O43292 621 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 PGK1P00558 417 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 ZNF792Q3KQV3 632 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 REPS2Q8NFH8 660 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 BADQ92934 168 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 LENG1Q96BZ8 264 aaPredicted RBP20.09■□□□□ 0.81
LINC01842-201ENST00000588275 PDLIM7Q9NR12 457 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 NRBP1Q9UHY1 535 aa20.09■□□□□ 0.81
LINC01842-201ENST00000588275 F5H6K3 240 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 M0R2C6 588 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 PRDM1O75626 825 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 NDUFB10O96000 172 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 KLRC3Q07444 240 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 SNX17Q15036 470 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 GIMAP6Q6P9H5 292 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 RNF180Q86T96 592 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 EPB41L4AQ9HCS5 686 aaPredicted RBP20.08■□□□□ 0.81
LINC01842-201ENST00000588275 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 CNPY2Q9Y2B0 182 aa20.08■□□□□ 0.81
LINC01842-201ENST00000588275 ROBO3Q96MS0 1386 aa20.08■□□□□ 0.8
LINC01842-201ENST00000588275 AKR1A1P14550 325 aa20.07■□□□□ 0.8
LINC01842-201ENST00000588275 SHHQ15465 462 aa20.07■□□□□ 0.8
LINC01842-201ENST00000588275 ZNF444Q8N0Y2 327 aaPredicted RBP20.07■□□□□ 0.8
LINC01842-201ENST00000588275 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
LINC01842-201ENST00000588275 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms