RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 HIF3AQ9Y2N7 669 aa9.19□□□□□ -0.94
RIOK3-206ENST00000581339 USP6P35125 1406 aa9.19□□□□□ -0.94
RIOK3-206ENST00000581339 F6X3S4 739 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 TMPRSS2O15393 492 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 TFE3P19532 575 aaPredicted RBP9.18□□□□□ -0.94
RIOK3-206ENST00000581339 COL18A1P39060 1754 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 USP11P51784 963 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 RREB1Q92766 1687 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 GAL3ST3Q96A11 431 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 MIR1-1HGQ9H1L0 117 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 GGT7Q9UJ14 662 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 PCDHA4Q9UN74 947 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 TLR6Q9Y2C9 796 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 PCDHGC5Q9Y5F6 944 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
RIOK3-206ENST00000581339 NUP188Q5SRE5 1749 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 SLIT3O75094 1523 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 SCAMP3O14828 347 aaKnown RBP9.17□□□□□ -0.94
RIOK3-206ENST00000581339 H2AFB1P0C5Y9 115 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 H2AFB2P0C5Z0 115 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 BMP3P12645 472 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
RIOK3-206ENST00000581339 SEPT6Q14141 434 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 FAM20CQ8IXL6 584 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 TMEM74Q96NL1 305 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 ATXN3LQ9H3M9 355 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 KBTBD4Q9NVX7 518 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 PEAK1Q9H792 1746 aa9.17□□□□□ -0.94
RIOK3-206ENST00000581339 PARP4Q9UKK3 1724 aaKnown RBP9.17□□□□□ -0.94
RIOK3-206ENST00000581339 TRPM1Q7Z4N2 1603 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 CRB1P82279 1406 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 ASPAP45381 313 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 FANCCQ00597 558 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 PTPN11Q06124 597 aaPredicted RBP9.16□□□□□ -0.94
RIOK3-206ENST00000581339 RSPO4Q2I0M5 234 aaPredicted RBP9.16□□□□□ -0.94
RIOK3-206ENST00000581339 ZC3H12AQ5D1E8 599 aaKnown RBP9.16□□□□□ -0.94
RIOK3-206ENST00000581339 PRR23CQ6ZRP0 262 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 YIPF2Q9BWQ6 316 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 COPRSQ9NQ92 184 aa9.16□□□□□ -0.94
RIOK3-206ENST00000581339 RGPD5Q99666 1765 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 TTC21BQ7Z4L5 1316 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 MAP4P27816 1152 aaKnown RBP9.15□□□□□ -0.94
RIOK3-206ENST00000581339 ERVK-24P63145 666 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 LMNB2Q03252 620 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 NKAPLQ5M9Q1 402 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 DIEXFQ68CQ4 756 aaKnown RBP9.15□□□□□ -0.94
RIOK3-206ENST00000581339 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
RIOK3-206ENST00000581339 RHOVQ96L33 236 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 KCNF1Q9H3M0 494 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 GSX1Q9H4S2 264 aaPredicted RBP9.15□□□□□ -0.94
RIOK3-206ENST00000581339 PIDD1Q9HB75 910 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 FAM105AQ9NUU6 356 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 RAXQ9Y2V3 346 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
RIOK3-206ENST00000581339 LRRC37A3O60309 1634 aa9.15□□□□□ -0.94
RIOK3-206ENST00000581339 BRD4O60885 1362 aaPredicted RBP9.14□□□□□ -0.95
RIOK3-206ENST00000581339 PARD3Q8TEW0 1356 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 EVC2Q86UK5 1308 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.14□□□□□ -0.95
RIOK3-206ENST00000581339 PF4P02776 101 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 FURINP09958 794 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 RAB6AP20340 208 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 CAMK2GQ13555 558 aaPredicted RBP9.14□□□□□ -0.95
RIOK3-206ENST00000581339 CCDC84Q86UT8 332 aaPredicted RBP9.14□□□□□ -0.95
RIOK3-206ENST00000581339 ARHGEF25Q86VW2 580 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 RNF34Q969K3 372 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
RIOK3-206ENST00000581339 DISC1Q9NRI5 854 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 SBF2Q86WG5 1849 aa9.14□□□□□ -0.95
RIOK3-206ENST00000581339 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 CDPF1Q6NVV7 123 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 BEND4Q6ZU67 534 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 TOM1L2Q6ZVM7 507 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 FBLIM1Q8WUP2 373 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 ELMO3Q96BJ8 720 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 STOML1Q9UBI4 398 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 AKAP12Q02952 1782 aa9.13□□□□□ -0.95
RIOK3-206ENST00000581339 CPSF1Q10570 1443 aaKnown RBP9.13□□□□□ -0.95
RIOK3-206ENST00000581339 ROCK2O75116 1388 aaKnown RBP9.12□□□□□ -0.95
RIOK3-206ENST00000581339 WDR17Q8IZU2 1322 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 NFAT5O94916 1531 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 DYRK3O43781 588 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 DDB1Q16531 1140 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 SNAP47Q5SQN1 464 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 LRFN4Q6PJG9 635 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
RIOK3-206ENST00000581339 HDXQ7Z353 690 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 CLEC10AQ8IUN9 316 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 JARID2Q92833 1246 aaPredicted RBP9.12□□□□□ -0.95
RIOK3-206ENST00000581339 PLPPR2Q96GM1 343 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 ACSS3Q9H6R3 686 aa9.12□□□□□ -0.95
RIOK3-206ENST00000581339 PICK1Q9NRD5 415 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms