RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 NR2E3Q9Y5X4 410 aa25.4■■□□□ 1.66
CSNK1D-216ENST00000581108 ADORA2AP29274 412 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 AAMPQ13685 434 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 TMEM132BQ14DG7 1078 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 MFSD14CQ5VZR4 134 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 LHX8Q68G74 356 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 DPP9Q86TI2 863 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 NCAPG2Q86XI2 1143 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 EVI5LQ96CN4 794 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 NAPBQ9H115 298 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 ZNF287Q9HBT7 754 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 CLIP2Q9UDT6 1046 aa25.39■■□□□ 1.66
CSNK1D-216ENST00000581108 IGKV6D-41A0A0C4DH26 115 aa25.38■■□□□ 1.65
CSNK1D-216ENST00000581108 EVI5O60447 810 aa25.38■■□□□ 1.65
CSNK1D-216ENST00000581108 NUP88Q99567 741 aaPredicted RBP25.38■■□□□ 1.65
CSNK1D-216ENST00000581108 NBPF3Q9H094 633 aa25.38■■□□□ 1.65
CSNK1D-216ENST00000581108 MROH8Q9H579 483 aa25.38■■□□□ 1.65
CSNK1D-216ENST00000581108 F5H6K3 240 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 FOXP2O15409 715 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 CYP2C19P33261 490 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 KLRC3Q07444 240 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 CHRDL2Q6WN34 429 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 LNPKQ9C0E8 428 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 RWDD1Q9H446 243 aaPredicted RBP25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 PPP1R9AQ9ULJ8 1098 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 ZNF236Q9UL36 1845 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 TRIOBPQ9H2D6 2365 aa25.37■■□□□ 1.65
CSNK1D-216ENST00000581108 VWA5AO00534 786 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 COBLO75128 1261 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 PPARAQ07869 468 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 B4GALNT3Q6L9W6 998 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 EXOC6Q8TAG9 804 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 CEP95Q96GE4 821 aa25.36■■□□□ 1.65
CSNK1D-216ENST00000581108 NDUFB10O96000 172 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 IGHA2P01877 340 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 IGHDP01880 384 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 PDE4BQ07343 736 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 FAM47AQ5JRC9 791 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 SMC5Q8IY18 1101 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 MKL1Q969V6 931 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 C11orf49Q9H6J7 331 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 MTMR4Q9NYA4 1195 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 FRMPD3Q5JV73 1810 aa25.35■■□□□ 1.65
CSNK1D-216ENST00000581108 SLC25A27O95847 323 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 SLC3A2P08195 630 aaKnown RBP25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 CNGA1P29973 690 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 VPS53Q5VIR6 699 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 ABRAQ8N0Z2 381 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 TRPV1Q8NER1 839 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 NEDD1Q8NHV4 660 aa25.34■■□□□ 1.65
CSNK1D-216ENST00000581108 TSPY3P0CV98 308 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 TSPY8P0CW00 308 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 FCER1AP12319 257 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 STAT3P40763 770 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 TFAP4Q01664 338 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 OLFML2BQ68BL8 750 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 RIOX2Q8IUF8 465 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 REPS2Q8NFH8 660 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 INCENPQ9NQS7 918 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 HELLSQ9NRZ9 838 aa25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 ZNF214Q9UL59 606 aaPredicted RBP25.33■■□□□ 1.65
CSNK1D-216ENST00000581108 RANBP2P49792 3224 aaKnown RBP25.33■■□□□ 1.64
CSNK1D-216ENST00000581108 TTLL1O95922 423 aa25.32■■□□□ 1.64
CSNK1D-216ENST00000581108 CTDSPL2Q05D32 466 aa25.32■■□□□ 1.64
CSNK1D-216ENST00000581108 FAM227BQ96M60 508 aa25.32■■□□□ 1.64
CSNK1D-216ENST00000581108 SLF1Q9BQI6 1058 aa25.32■■□□□ 1.64
CSNK1D-216ENST00000581108 LRRC47Q8N1G4 583 aaKnown RBP25.31■■□□□ 1.64
CSNK1D-216ENST00000581108 SLC5A4Q9NY91 659 aa25.31■■□□□ 1.64
CSNK1D-216ENST00000581108 RBM27Q9P2N5 1060 aaKnown RBP25.31■■□□□ 1.64
CSNK1D-216ENST00000581108 DDX20Q9UHI6 824 aaKnown RBP25.31■■□□□ 1.64
CSNK1D-216ENST00000581108 PFASO15067 1338 aa25.31■■□□□ 1.64
CSNK1D-216ENST00000581108 COL6A1P12109 1028 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 CYBAP13498 195 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 FXR1P51114 621 aaKnown RBP eCLIP25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 C7orf61Q8IZ16 206 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 PRPF38AQ8NAV1 312 aaKnown RBP25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 MMP19Q99542 508 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 PLIN4Q96Q06 1357 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 PLXNA1Q9UIW2 1896 aa25.3■■□□□ 1.64
CSNK1D-216ENST00000581108 A0A0D9SFI3 127 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 TRIM6-TRIM34B2RNG4 842 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 PGK2P07205 417 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 PRAMEF19Q5SWL8 479 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 CHD1LQ86WJ1 897 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 MAML3Q96JK9 1138 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 TACC3Q9Y6A5 838 aa25.29■■□□□ 1.64
CSNK1D-216ENST00000581108 KCTD2Q14681 263 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 MCMDC2Q4G0Z9 681 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 GMCL1P1Q8NEA9 526 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 RILPL2Q969X0 211 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 KIFC2Q96AC6 838 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 PRO3102Q9H379 93 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 SYNPO2Q9UMS6 1093 aa25.28■■□□□ 1.64
CSNK1D-216ENST00000581108 SMCHD1A6NHR9 2005 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 MSCO60682 206 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 NUCB1Q02818 461 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 NMIQ13287 307 aaPredicted RBP25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 ALX1Q15699 326 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 SLFN13Q68D06 897 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms