RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 ZAP70P43403 619 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 USP5P45974 858 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 MTX1Q13505 466 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 COG2Q14746 738 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 MFSD5Q6N075 450 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 TRMT2AQ8IZ69 625 aaKnown RBP11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 ATG4CQ96DT6 458 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 C1QTNF1Q9BXJ1 281 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 EHD4Q9H223 541 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 EPHX3Q9H6B9 360 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 SLC5A4Q9NY91 659 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 CXXC1Q9P0U4 656 aaPredicted RBP11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 CT47B1P0C2W7 299 aaPredicted RBP11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 CYP7A1P22680 504 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 DSG3P32926 999 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 PLCD1P51178 756 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 ACLYP53396 1101 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■□□□□ 8.9
SMARCD2-208ENST00000580054 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 TINF2Q9BSI4 451 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 MROH8Q9H579 483 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 HOXC10Q9NYD6 342 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 HCN4Q9Y3Q4 1203 aa11.33□□□□□ -0.6
SMARCD2-208ENST00000580054 TRANK1O15050 2925 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 APBB1O00213 710 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 GNAI3P08754 354 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 FCER1AP12319 257 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 AKR1A1P14550 325 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 TMEM132BQ14DG7 1078 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 RAB30Q15771 203 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 SPICE1Q8N0Z3 855 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 MMP19Q99542 508 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
SMARCD2-208ENST00000580054 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 FLOT1O75955 427 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 RABGGTBP53611 331 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 KCNA10Q16322 511 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 TNNI3KQ59H18 835 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 MB21D1Q8N884 522 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 KLHDC9Q8NEP7 349 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 FPGT-TNNI3KV9GXZ4 949 aa11.31□□□□□ -0.6
SMARCD2-208ENST00000580054 FAM86C2PA6NEL3 165 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 ADCY6O43306 1168 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 IDH1O75874 414 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 MYOGP15173 224 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 CYP2C18P33260 490 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 CDK7P50613 346 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 GABPAQ06546 454 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 CCDC174Q6PII3 467 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 TTC6Q86TZ1 520 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 MAGEB6Q8N7X4 407 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 HERVK_113Q902F9 699 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 TLR7Q9NYK1 1049 aaKnown RBP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
SMARCD2-208ENST00000580054 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 SIAH1Q8IUQ4 282 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 IL23AQ9NPF7 189 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 FBXO28Q9NVF7 368 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
SMARCD2-208ENST00000580054 RFXAPO00287 272 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 SLC25A27O95847 323 aa11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 POLR3DP05423 398 aaPredicted RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 CENPBP07199 599 aaPredicted RBP11.28□□□□□ -0.6
SMARCD2-208ENST00000580054 ASGR1P07306 291 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms