RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 FOXD3Q9UJU5 478 aaPredicted RBP7.75□□□□□ -1.17
COPS3-216ENST00000579716 MAFFQ9ULX9 164 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 INPP5FQ9Y2H2 1132 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 IKBKGQ9Y6K9 419 aa7.75□□□□□ -1.17
COPS3-216ENST00000579716 FAM177BA6PVY3 158 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 PRRT4C9JH25 899 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 TSPAN6O43657 245 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
COPS3-216ENST00000579716 MPSTP25325 297 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 ARL4DP49703 201 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 RGS3P49796 1198 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 ZNF132P52740 706 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 TMED1Q13445 227 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 CPSF6Q16630 551 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPS3-216ENST00000579716 ZNF423Q2M1K9 1284 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 CCDC158Q5M9N0 1113 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 ARL6IP6Q8N6S5 226 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 PMEPA1Q969W9 287 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 MPP4Q96JB8 637 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 POLR3CQ9BUI4 534 aaPredicted RBP7.74□□□□□ -1.17
COPS3-216ENST00000579716 ZC3H7BQ9UGR2 993 aaKnown RBP7.74□□□□□ -1.17
COPS3-216ENST00000579716 POLIQ9UNA4 740 aa7.74□□□□□ -1.17
COPS3-216ENST00000579716 FAM170AA1A519 330 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 CHL1O00533 1208 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 CYP26A1O43174 497 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
COPS3-216ENST00000579716 PSMA3P25788 255 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 ZNF76P36508 570 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 GEMIN4P57678 1058 aaKnown RBP7.73□□□□□ -1.17
COPS3-216ENST00000579716 MTMR3Q13615 1198 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 TRIM29Q14134 588 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 MORC3Q14149 939 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 NFE2Q16621 373 aaPredicted RBP7.73□□□□□ -1.17
COPS3-216ENST00000579716 SLC4A8Q2Y0W8 1093 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 ARSHQ5FYA8 562 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 HYIQ5T013 277 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 SEZ6L2Q6UXD5 910 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 USP48Q86UV5 1035 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 BRSK2Q8IWQ3 736 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 PPHLN1Q8NEY8 458 aaKnown RBP7.73□□□□□ -1.17
COPS3-216ENST00000579716 E2F7Q96AV8 911 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 MRS2Q9HD23 443 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 DCTN4Q9UJW0 460 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 GTF2A1LQ9UNN4 478 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 ACTL7BQ9Y614 415 aa7.73□□□□□ -1.17
COPS3-216ENST00000579716 CCDC175P0C221 793 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 NPR3P17342 541 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 TRPC1P48995 793 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 PPM1FP49593 454 aaPredicted RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 E2F5Q15329 346 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 UTP14CQ5TAP6 766 aaKnown RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 DAAM2Q86T65 1068 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 ARHGEF25Q86VW2 580 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 RAVER1Q8IY67 606 aaKnown RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 CKAP2LQ8IYA6 745 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 CPXCR1Q8N123 301 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 FBXL18Q96ME1 805 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 TBC1D32Q96NH3 1257 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 SELENOOQ9BVL4 669 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 CCDC94Q9BW85 323 aaPredicted RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 PDGFDQ9GZP0 370 aaPredicted RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
COPS3-216ENST00000579716 ANGEL1Q9UNK9 670 aaKnown RBP7.72□□□□□ -1.17
COPS3-216ENST00000579716 GTPBP10A4D1E9 387 aaKnown RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 MPHOSPH10O00566 681 aaKnown RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 CDC45O75419 566 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 PAPLNO95428 1278 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 ECEL1O95672 775 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 NFICP08651 508 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 LMNB1P20700 586 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 USP11P51784 963 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 EPHB1P54762 984 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 CHMP4BP1P59074 171 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 TTC30AQ86WT1 665 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 TP53INP2Q8IXH6 220 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 ASAP3Q8TDY4 903 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 GTF3C2Q8WUA4 911 aaPredicted RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 GPR101Q96P66 508 aaPredicted RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 KRTAP4-2Q9BYR5 136 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 C1GALT1Q9NS00 363 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 UTP6Q9NYH9 597 aaKnown RBP7.71□□□□□ -1.18
COPS3-216ENST00000579716 EGFL7Q9UHF1 273 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 IP6K2Q9UHH9 426 aa7.71□□□□□ -1.18
COPS3-216ENST00000579716 CARMIL2Q6F5E8 1435 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 CTAGE5O15320 804 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 FZD6O60353 706 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 NAT2P11245 290 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 ADH5P11766 374 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 ATF3P18847 181 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 TSPAN7P41732 249 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 GSTM4Q03013 218 aa7.7□□□□□ -1.18
COPS3-216ENST00000579716 PDE3BQ13370 1112 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms