RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ATL3Q6DD88 541 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 TATDN1Q6P1N9 297 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 GPKOWQ92917 476 aaPredicted RBP eCLIP23.28■■□□□ 1.32
SMG8-203ENST00000578922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMG8-203ENST00000578922 RAD21O60216 631 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 SAMD7Q7Z3H4 446 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 NOSTRINQ8IVI9 506 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMG8-203ENST00000578922 RTEL1Q9NZ71 1219 aa23.28■■□□□ 1.32
SMG8-203ENST00000578922 PDHBP11177 359 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 SEPT2Q15019 361 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 PFKFB3Q16875 520 aaPredicted RBP23.27■■□□□ 1.32
SMG8-203ENST00000578922 BICD2Q8TD16 824 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 ZBED3Q96IU2 234 aaPredicted RBP23.27■■□□□ 1.32
SMG8-203ENST00000578922 PHF20Q9BVI0 1012 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 VAT1LQ9HCJ6 419 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 USP25Q9UHP3 1055 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 ADCY5O95622 1261 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 LIG1P18858 919 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 JAG1P78504 1218 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 RRP1BQ14684 758 aaKnown RBP23.27■■□□□ 1.32
SMG8-203ENST00000578922 STK38Q15208 465 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 ABCB5Q2M3G0 1257 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 TBC1D10BQ4KMP7 808 aaPredicted RBP23.27■■□□□ 1.32
SMG8-203ENST00000578922 UBA5Q9GZZ9 404 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 PDCL3Q9H2J4 239 aa23.27■■□□□ 1.32
SMG8-203ENST00000578922 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
SMG8-203ENST00000578922 ME1P48163 572 aa23.26■■□□□ 1.31
SMG8-203ENST00000578922 CNOT7Q9UIV1 285 aaKnown RBP23.26■■□□□ 1.31
SMG8-203ENST00000578922 EEF2P13639 858 aaKnown RBP23.25■■□□□ 1.31
SMG8-203ENST00000578922 ZNF280AP59817 542 aaPredicted RBP23.25■■□□□ 1.31
SMG8-203ENST00000578922 ANO1Q5XXA6 986 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 SASS6Q6UVJ0 657 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 METTL16Q86W50 562 aaKnown RBP23.25■■□□□ 1.31
SMG8-203ENST00000578922 HOMER1Q86YM7 354 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 FOXP1Q9H334 677 aaPredicted RBP23.25■■□□□ 1.31
SMG8-203ENST00000578922 GPCPD1Q9NPB8 672 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 ASTN2O75129 1339 aaPredicted RBP23.25■■□□□ 1.31
SMG8-203ENST00000578922 GH2P01242 217 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 CCDC192P0DO97 292 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 LINC00301Q8NCQ3 95 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 POLR3EQ9NVU0 708 aa23.25■■□□□ 1.31
SMG8-203ENST00000578922 SF3A1Q15459 793 aaKnown RBP23.24■■□□□ 1.31
SMG8-203ENST00000578922 COL2A1P02458 1487 aaPredicted RBP23.24■■□□□ 1.31
SMG8-203ENST00000578922 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
SMG8-203ENST00000578922 KRT2P35908 639 aa23.24■■□□□ 1.31
SMG8-203ENST00000578922 NLRP5P59047 1200 aa23.24■■□□□ 1.31
SMG8-203ENST00000578922 HEATR3Q7Z4Q2 680 aa23.24■■□□□ 1.31
SMG8-203ENST00000578922 SYT17Q9BSW7 474 aa23.24■■□□□ 1.31
SMG8-203ENST00000578922 GREB1LQ9C091 1923 aaPredicted RBP23.23■■□□□ 1.31
SMG8-203ENST00000578922 FAM205CA6NFA0 338 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 TPM3P06753 285 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 ICA1Q05084 483 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 TMEM179Q6ZVK1 233 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 MAP7D2Q96T17 732 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 LZTS2Q9BRK4 669 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 KANSL2Q9H9L4 492 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 CABP5Q9NP86 173 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 HERC5Q9UII4 1024 aaKnown RBP23.23■■□□□ 1.31
SMG8-203ENST00000578922 MYH4Q9Y623 1939 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 ADAMTS3O15072 1205 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 FKBP1CQ5VVH2 108 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 PCDHA7Q9UN72 937 aa23.23■■□□□ 1.31
SMG8-203ENST00000578922 SPTLC2O15270 562 aa23.22■■□□□ 1.31
SMG8-203ENST00000578922 NPY5RQ15761 445 aa23.22■■□□□ 1.31
SMG8-203ENST00000578922 CCDC96Q2M329 555 aa23.22■■□□□ 1.31
SMG8-203ENST00000578922 NOM1Q5C9Z4 860 aaKnown RBP23.22■■□□□ 1.31
SMG8-203ENST00000578922 EARS2Q5JPH6 523 aaKnown RBP23.22■■□□□ 1.31
SMG8-203ENST00000578922 WWC2Q6AWC2 1192 aa23.22■■□□□ 1.31
SMG8-203ENST00000578922 DYNC1I1O14576 645 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 YEATS4O95619 227 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 LMNB1P20700 586 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 MARCKSP29966 332 aaPredicted RBP23.21■■□□□ 1.31
SMG8-203ENST00000578922 RASA3Q14644 834 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 TYW1BQ6NUM6 668 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 KCTD1Q719H9 257 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 FAM83AQ86UY5 434 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 SIAH1Q8IUQ4 282 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 DPF2Q92785 391 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 SPZ1Q9BXG8 430 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
SMG8-203ENST00000578922 TTBK2Q6IQ55 1244 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 PIGSQ96S52 555 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 BRMS1Q9HCU9 246 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 DACT1Q9NYF0 836 aa23.21■■□□□ 1.31
SMG8-203ENST00000578922 SNHG28P0DPA3 235 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 ZNF543Q08ER8 600 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 ASPRV1Q53RT3 343 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
SMG8-203ENST00000578922 KCNG4Q8TDN1 519 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
SMG8-203ENST00000578922 UQCRHLA0A096LP55 91 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 NR1I2O75469 434 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 UQCRHP07919 91 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 SLC16A2P36021 539 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 MAP3K11Q16584 847 aa23.2■■□□□ 1.3
SMG8-203ENST00000578922 KIF4BQ2VIQ3 1234 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms