RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SPDYE6P0CI01 402 aa19.56■□□□□ 0.72
SREBF1-218ENST00000578469 NOVP48745 357 aa19.56■□□□□ 0.72
SREBF1-218ENST00000578469 CACNB3P54284 484 aa19.56■□□□□ 0.72
SREBF1-218ENST00000578469 FUT2Q10981 343 aa19.56■□□□□ 0.72
SREBF1-218ENST00000578469 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
SREBF1-218ENST00000578469 V9GY48 417 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-218ENST00000578469 COL2A1P02458 1487 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-218ENST00000578469 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 TRPA1O75762 1119 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 EGFRP00533 1210 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 MMP1P03956 469 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 SLC10A3P09131 477 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 AKR1B1P15121 316 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 GUCY1A2P33402 732 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 SHMT1P34896 483 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
SREBF1-218ENST00000578469 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 DLK2Q6UY11 383 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 ZFPM1Q8IX07 1006 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 REM2Q8IYK8 340 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-218ENST00000578469 SRBD1Q8N5C6 995 aaKnown RBP19.55■□□□□ 0.72
SREBF1-218ENST00000578469 MTMR14Q8NCE2 650 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 CEP95Q96GE4 821 aa19.55■□□□□ 0.72
SREBF1-218ENST00000578469 CNTNAP5Q8WYK1 1306 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 POLR2AP24928 1970 aaKnown RBP19.54■□□□□ 0.72
SREBF1-218ENST00000578469 MYO1BO43795 1136 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 U2AF2P26368 475 aaKnown RBP eCLIP19.54■□□□□ 0.72
SREBF1-218ENST00000578469 ZSCAN23Q3MJ62 389 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 USP28Q96RU2 1077 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.54■□□□□ 0.72
SREBF1-218ENST00000578469 FOXP1Q9H334 677 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-218ENST00000578469 RNF186Q9NXI6 227 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 MTMR4Q9NYA4 1195 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 RTEL1Q9NZ71 1219 aa19.54■□□□□ 0.72
SREBF1-218ENST00000578469 IGKV6D-41A0A0C4DH26 115 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 DDTLA6NHG4 134 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 KIF28PB7ZC32 967 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 MPHOSPH10O00566 681 aaKnown RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 LETM1O95202 739 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 YEATS4O95619 227 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 ZNF445P59923 1031 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 TMEM63CQ9P1W3 806 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 ZNF70Q9UC06 446 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-218ENST00000578469 ATRNL1Q5VV63 1379 aa19.53■□□□□ 0.72
SREBF1-218ENST00000578469 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-218ENST00000578469 TTLL1O95922 423 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 SOX10P56693 466 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 STK38Q15208 465 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
SREBF1-218ENST00000578469 PKN1Q16512 942 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 CERKLQ49MI3 558 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-218ENST00000578469 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 CCDC183Q5T5S1 534 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 CTU1Q7Z7A3 348 aaKnown RBP19.52■□□□□ 0.72
SREBF1-218ENST00000578469 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.72
SREBF1-218ENST00000578469 FAM151AQ8WW52 585 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 CDCA5Q96FF9 252 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 POLR3EQ9NVU0 708 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 MAD2L2Q9UI95 211 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 MYH15Q9Y2K3 1946 aa19.52■□□□□ 0.72
SREBF1-218ENST00000578469 TNRC18O15417 2968 aaPredicted RBP19.52■□□□□ 0.71
SREBF1-218ENST00000578469 UBE2Q2LH0YL09 131 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 SCG2P13521 617 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 FKBP1BP68106 108 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 PFKFB3Q16875 520 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-218ENST00000578469 SPDYE2Q495Y8 402 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 SH3BP5LQ7L8J4 393 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 METTL16Q86W50 562 aaKnown RBP19.51■□□□□ 0.71
SREBF1-218ENST00000578469 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 BICD2Q8TD16 824 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 KCNG4Q8TDN1 519 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 KCNJ14Q9UNX9 436 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 MTMR7Q9Y216 660 aa19.51■□□□□ 0.71
SREBF1-218ENST00000578469 PAPPA2Q9BXP8 1791 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 TCP10L2B9ZVM9 353 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 KRT2P35908 639 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-218ENST00000578469 ANO1Q5XXA6 986 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 TATDN1Q6P1N9 297 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 CLIP2Q9UDT6 1046 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 HERC5Q9UII4 1024 aaKnown RBP19.5■□□□□ 0.71
SREBF1-218ENST00000578469 MYH8P13535 1937 aa19.5■□□□□ 0.71
SREBF1-218ENST00000578469 CLRN2A0PK11 232 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 FSD2A1L4K1 749 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 BTBD18B2RXH4 712 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 KLRF2D3W0D1 207 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 ASPRV1Q53RT3 343 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 ANGEL2Q5VTE6 544 aaKnown RBP19.49■□□□□ 0.71
SREBF1-218ENST00000578469 RASAL3Q86YV0 1011 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-218ENST00000578469 STAG2Q8N3U4 1231 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 CSRNP1Q96S65 589 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 PHF20Q9BVI0 1012 aa19.49■□□□□ 0.71
SREBF1-218ENST00000578469 SPZ1Q9BXG8 430 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms