RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 DDX41Q9UJV9 622 aaKnown RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 ENOX1Q8TC92 643 aaKnown RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 KCNK9Q9NPC2 374 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 SPOPO43791 374 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 TECP42680 631 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 CHRNDQ07001 517 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 NCBP1Q09161 790 aaKnown RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 NAP1L3Q99457 506 aaPredicted RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 PDE11AQ9HCR9 933 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 SAMD15Q9P1V8 674 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
RNF43-203ENST00000577716 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 CHMP2AO43633 222 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
RNF43-203ENST00000577716 PRKAB2O43741 272 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 MMP1P03956 469 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 SLC1A4P43007 532 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 NCAPH2Q6IBW4 605 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 CAMSAP1Q5T5Y3 1602 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 FLOT1O75955 427 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 EYA3Q99504 573 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 IMPG2Q9BZV3 1241 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 DIP2CQ9Y2E4 1556 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
RNF43-203ENST00000577716 VIMP08670 466 aaKnown RBP12.1□□□□□ -0.47
RNF43-203ENST00000577716 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 CLCN6P51797 869 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 RBL2Q08999 1139 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 CCDC144BQ3MJ40 725 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 DAAM2Q86T65 1068 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 NUCKS1Q9H1E3 243 aaKnown RBP12.1□□□□□ -0.47
RNF43-203ENST00000577716 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
RNF43-203ENST00000577716 H7C1W4 665 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 ENC1O14682 589 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 GOLGA8HP0CJ92 632 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 NAA30Q147X3 362 aaPredicted RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 PEX26Q7Z412 305 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 DDAH1O94760 285 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 CERS3Q8IU89 383 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 VEZTQ9HBM0 779 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 SLC39A2Q9NP94 309 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 CCNL1Q9UK58 526 aaPredicted RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 NRXN1Q9ULB1 1477 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 CDC25AP30304 524 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 LIFRP42702 1097 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 UTP11Q9Y3A2 253 aaKnown RBP12.09□□□□□ -0.47
RNF43-203ENST00000577716 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
RNF43-203ENST00000577716 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 CCDC151A5D8V7 595 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 ATP8B1O43520 1251 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 CALUO43852 315 aaPredicted RBP12.08□□□□□ -0.48
RNF43-203ENST00000577716 ZBTB16Q05516 673 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 CCDC6Q16204 474 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 FMR1NBQ8N0W7 255 aaPredicted RBP12.08□□□□□ -0.48
RNF43-203ENST00000577716 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 MED4Q9NPJ6 270 aa12.08□□□□□ -0.48
RNF43-203ENST00000577716 HDAC9Q9UKV0 1011 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms