RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 OLFML2BQ68BL8 750 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 LHX8Q68G74 356 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 IFNL3Q8IZI9 196 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 FLRT1Q9NZU1 646 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 SMCHD1A6NHR9 2005 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 A0A1W2PPC1 479 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 M0R2C6 588 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 NCAPG2Q86XI2 1143 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.82■□□□□ 0.44
MKS1-205ENST00000577315 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
MKS1-205ENST00000577315 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
MKS1-205ENST00000577315 PPP1R9AQ9ULJ8 1098 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 SYNPO2Q9UMS6 1093 aa17.82■□□□□ 0.44
MKS1-205ENST00000577315 IGHA2P01877 340 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 FCER1AP12319 257 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 PDE4BQ07343 736 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
MKS1-205ENST00000577315 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 RIOX2Q8IUF8 465 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 CRBNQ96SW2 442 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 NAPBQ9H115 298 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 PRO3102Q9H379 93 aa17.81■□□□□ 0.44
MKS1-205ENST00000577315 DDX20Q9UHI6 824 aaKnown RBP17.81■□□□□ 0.44
MKS1-205ENST00000577315 RAD21O60216 631 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 COL6A1P12109 1028 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 CNGA1P29973 690 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 TMEM132BQ14DG7 1078 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 PPP4R3BQ5MIZ7 849 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 FAM83BQ5T0W9 1011 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
MKS1-205ENST00000577315 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
MKS1-205ENST00000577315 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 F5H6K3 240 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 VWA5AO00534 786 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 CYBAP13498 195 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 CYP2C19P33261 490 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 STAT3P40763 770 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 KLRC3Q07444 240 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 C7orf61Q8IZ16 206 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 STK11IPQ8N1F8 1099 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
MKS1-205ENST00000577315 MKL1Q969V6 931 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 EVI5LQ96CN4 794 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 PLIN4Q96Q06 1357 aa17.79■□□□□ 0.44
MKS1-205ENST00000577315 PFASO15067 1338 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 IGKV6D-41A0A0C4DH26 115 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 COBLO75128 1261 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
MKS1-205ENST00000577315 NEDD1Q8NHV4 660 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
MKS1-205ENST00000577315 MMP19Q99542 508 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 FBXO28Q9NVF7 368 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 CLIP2Q9UDT6 1046 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
MKS1-205ENST00000577315 DIS3Q9Y2L1 958 aaKnown RBP17.78■□□□□ 0.44
MKS1-205ENST00000577315 TTLL1O95922 423 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 BMP8BP34820 402 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 PPARAQ07869 468 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 KCTD2Q14681 263 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 ARRDC4Q8NCT1 418 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 MAML3Q96JK9 1138 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 MTMR4Q9NYA4 1195 aa17.77■□□□□ 0.44
MKS1-205ENST00000577315 ZNF214Q9UL59 606 aaPredicted RBP17.77■□□□□ 0.44
MKS1-205ENST00000577315 DNM1LO00429 736 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 SEPT4O43236 478 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 PRDM1O75626 825 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 NDUFB10O96000 172 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 PDE1AP54750 535 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 TEX13BQ9BXU2 312 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
MKS1-205ENST00000577315 CTDP1Q9Y5B0 961 aaPredicted RBP17.76■□□□□ 0.43
MKS1-205ENST00000577315 ATP2A1O14983 1001 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 ZBED4O75132 1171 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 FDX1P10109 184 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 TRPV1Q8NER1 839 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 GDF15Q99988 308 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
MKS1-205ENST00000577315 HELLSQ9NRZ9 838 aa17.75■□□□□ 0.43
MKS1-205ENST00000577315 TFAP4Q01664 338 aa17.74■□□□□ 0.43
MKS1-205ENST00000577315 MSL3Q8N5Y2 521 aaKnown RBP17.74■□□□□ 0.43
MKS1-205ENST00000577315 SENP6Q9GZR1 1112 aaPredicted RBP17.74■□□□□ 0.43
MKS1-205ENST00000577315 ZMYND8Q9ULU4 1186 aaPredicted RBP17.74■□□□□ 0.43
MKS1-205ENST00000577315 KBTBD13C9JR72 458 aa17.73■□□□□ 0.43
MKS1-205ENST00000577315 OAZ1P54368 228 aa17.73■□□□□ 0.43
MKS1-205ENST00000577315 ZNF792Q3KQV3 632 aa17.73■□□□□ 0.43
MKS1-205ENST00000577315 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
MKS1-205ENST00000577315 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
MKS1-205ENST00000577315 MCM3APO60318 1980 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 BMP3P12645 472 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 ALX1Q15699 326 aa17.72■□□□□ 0.43
MKS1-205ENST00000577315 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms