RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
TVP23A-209ENST00000575135 MYH7P12883 1935 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 MYCNP04198 464 aaPredicted RBP20.14■□□□□ 0.81
TVP23A-209ENST00000575135 FCER1AP12319 257 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 MAML3Q96JK9 1138 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 PRKAG2Q9UGJ0 569 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 ATP11BQ9Y2G3 1177 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 STXBP5LQ9Y2K9 1186 aa20.14■□□□□ 0.81
TVP23A-209ENST00000575135 COL11A1P12107 1806 aaPredicted RBP20.13■□□□□ 0.81
TVP23A-209ENST00000575135 KBTBD13C9JR72 458 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 SLC39A5Q6ZMH5 540 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 DDRGK1Q96HY6 314 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 PUS7LQ9H0K6 701 aaKnown RBP20.13■□□□□ 0.81
TVP23A-209ENST00000575135 CHMP4BQ9H444 224 aaKnown RBP20.13■□□□□ 0.81
TVP23A-209ENST00000575135 KANSL2Q9H9L4 492 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 FBXO28Q9NVF7 368 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 ADAMTS5Q9UNA0 930 aa20.13■□□□□ 0.81
TVP23A-209ENST00000575135 SMCHD1A6NHR9 2005 aa20.12■□□□□ 0.81
TVP23A-209ENST00000575135 SLC25A27O95847 323 aa20.12■□□□□ 0.81
TVP23A-209ENST00000575135 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
TVP23A-209ENST00000575135 ADCYAP1R1P41586 468 aa20.11■□□□□ 0.81
TVP23A-209ENST00000575135 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
TVP23A-209ENST00000575135 RIOX2Q8IUF8 465 aa20.11■□□□□ 0.81
TVP23A-209ENST00000575135 MMP19Q99542 508 aa20.11■□□□□ 0.81
TVP23A-209ENST00000575135 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
TVP23A-209ENST00000575135 POTEB2H3BUK9 544 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 VWA5AO00534 786 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 RAD21O60216 631 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 PGK2P07205 417 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 LRRC41Q15345 812 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 FAM47AQ5JRC9 791 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 FERMT2Q96AC1 680 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
TVP23A-209ENST00000575135 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 PRDM5Q9NQX1 630 aaPredicted RBP20.1■□□□□ 0.81
TVP23A-209ENST00000575135 LTBP2Q14767 1821 aa20.1■□□□□ 0.81
TVP23A-209ENST00000575135 EYSQ5T1H1 3165 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 STAT3P40763 770 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 SNX17Q15036 470 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 TRIM60Q495X7 471 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 FAM83BQ5T0W9 1011 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
TVP23A-209ENST00000575135 RCAN3Q9UKA8 241 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 PPP1R9AQ9ULJ8 1098 aa20.09■□□□□ 0.81
TVP23A-209ENST00000575135 PLXNA1Q9UIW2 1896 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 KCTD2Q14681 263 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 ZNF792Q3KQV3 632 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 C20orf194Q5TEA3 1177 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 FAM109BQ6ICB4 259 aaPredicted RBP20.08■□□□□ 0.81
TVP23A-209ENST00000575135 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 TINF2Q9BSI4 451 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
TVP23A-209ENST00000575135 NRBP1Q9UHY1 535 aa20.08■□□□□ 0.81
TVP23A-209ENST00000575135 ZNF214Q9UL59 606 aaPredicted RBP20.08■□□□□ 0.81
TVP23A-209ENST00000575135 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
TVP23A-209ENST00000575135 SHHQ15465 462 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 BADQ92934 168 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 GUCD1Q96NT3 240 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 NUP88Q99567 741 aaPredicted RBP20.07■□□□□ 0.8
TVP23A-209ENST00000575135 XPNPEP3Q9NQH7 507 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 ECHDC1Q9NTX5 307 aa20.07■□□□□ 0.8
TVP23A-209ENST00000575135 GSG1L2A8MUP6 293 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 RARBP10826 455 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 SH3RF1Q7Z6J0 888 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 PDLIM7Q9NR12 457 aa20.06■□□□□ 0.8
TVP23A-209ENST00000575135 DIS3Q9Y2L1 958 aaKnown RBP20.06■□□□□ 0.8
TVP23A-209ENST00000575135 GREB1LQ9C091 1923 aaPredicted RBP20.06■□□□□ 0.8
TVP23A-209ENST00000575135 PRUNE2Q8WUY3 3088 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 TRIM43BA6NCK2 446 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 MINDY4BA8MYZ0 360 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 RASA1P20936 1047 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 TLE2Q04725 743 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 C9orf50Q5SZB4 431 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 C1orf53Q5VUE5 145 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 TRIM43Q96BQ3 446 aaPredicted RBP20.05■□□□□ 0.8
TVP23A-209ENST00000575135 MKNK2Q9HBH9 465 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 PHF24Q9UPV7 400 aa20.05■□□□□ 0.8
TVP23A-209ENST00000575135 F5H6K3 240 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 PGK1P00558 417 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 ZNF865P0CJ78 1059 aaPredicted RBP20.04■□□□□ 0.8
TVP23A-209ENST00000575135 COPB2P35606 906 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 KLRC3Q07444 240 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 OSBP2Q969R2 916 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 SLF1Q9BQI6 1058 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 NYAP2Q9P242 653 aa20.04■□□□□ 0.8
TVP23A-209ENST00000575135 NDUFB10O96000 172 aa20.03■□□□□ 0.8
TVP23A-209ENST00000575135 TSHZ3Q63HK5 1081 aa20.03■□□□□ 0.8
TVP23A-209ENST00000575135 RNF180Q86T96 592 aa20.03■□□□□ 0.8
TVP23A-209ENST00000575135 LENG1Q96BZ8 264 aaPredicted RBP20.03■□□□□ 0.8
TVP23A-209ENST00000575135 TEX13BQ9BXU2 312 aa20.03■□□□□ 0.8
TVP23A-209ENST00000575135 RIPK3Q9Y572 518 aa20.03■□□□□ 0.8
TVP23A-209ENST00000575135 AKR1A1P14550 325 aa20.02■□□□□ 0.8
TVP23A-209ENST00000575135 ZNF697Q5TEC3 545 aa20.02■□□□□ 0.8
TVP23A-209ENST00000575135 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms