RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TRPV1Q8NER1 839 aa14.61□□□□□ -0.07
CCDC40-210ENST00000573903 MMP19Q99542 508 aa14.61□□□□□ -0.07
CCDC40-210ENST00000573903 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
CCDC40-210ENST00000573903 COBLO75128 1261 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 RTP1P59025 263 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 ANO1Q5XXA6 986 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 CTR9Q6PD62 1173 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 MAML3Q96JK9 1138 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
CCDC40-210ENST00000573903 MKNK2Q9HBH9 465 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 ATP11BQ9Y2G3 1177 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 PLXNA1Q9UIW2 1896 aa14.6□□□□□ -0.07
CCDC40-210ENST00000573903 ZNFX1Q9P2E3 1918 aaKnown RBP14.6□□□□□ -0.07
CCDC40-210ENST00000573903 SMARCA5O60264 1052 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-210ENST00000573903 IGHA2P01877 340 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 TMEM132BQ14DG7 1078 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 LRRFIP1Q32MZ4 808 aaKnown RBP14.59□□□□□ -0.07
CCDC40-210ENST00000573903 RIOX2Q8IUF8 465 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 ZNF287Q9HBT7 754 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
CCDC40-210ENST00000573903 SMIM22K7EJ46 135 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 CHGBP05060 677 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 RARBP10826 455 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 STAT3P40763 770 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 GIMAP6Q6P9H5 292 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 KBTBD3Q8NAB2 608 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 APPBP2Q92624 585 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 PRDM5Q9NQX1 630 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-210ENST00000573903 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.08
CCDC40-210ENST00000573903 CTDP1Q9Y5B0 961 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-210ENST00000573903 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-210ENST00000573903 LTBP2Q14767 1821 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 MINDY4BA8MYZ0 360 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 VWA5AO00534 786 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 ZFYP08048 801 aaPredicted RBP14.57□□□□□ -0.08
CCDC40-210ENST00000573903 GNAT2P19087 354 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 TDO2P48775 406 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 SBK1Q52WX2 424 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 FAM47AQ5JRC9 791 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 SLC39A5Q6ZMH5 540 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 Q7L0L9 218 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 STRBPQ96SI9 672 aaKnown RBP14.57□□□□□ -0.08
CCDC40-210ENST00000573903 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 XPNPEP3Q9NQH7 507 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 ADAMTS5Q9UNA0 930 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 ROBO3Q96MS0 1386 aa14.57□□□□□ -0.08
CCDC40-210ENST00000573903 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 LAMA3Q16787 3333 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 APPP05067 770 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 PGK2P07205 417 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 LRRC41Q15345 812 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 RNF180Q86T96 592 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 ZNF214Q9UL59 606 aaPredicted RBP14.56□□□□□ -0.08
CCDC40-210ENST00000573903 CNPY2Q9Y2B0 182 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
CCDC40-210ENST00000573903 DIS3Q9Y2L1 958 aaKnown RBP14.56□□□□□ -0.08
CCDC40-210ENST00000573903 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
CCDC40-210ENST00000573903 GPAA1O43292 621 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 AKR1A1P14550 325 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 RASA1P20936 1047 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 ADCYAP1R1P41586 468 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 RRP1P56182 461 aaKnown RBP14.55□□□□□ -0.08
CCDC40-210ENST00000573903 TRIM60Q495X7 471 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 SNRNP48Q6IEG0 339 aaKnown RBP14.55□□□□□ -0.08
CCDC40-210ENST00000573903 ZNF444Q8N0Y2 327 aaPredicted RBP14.55□□□□□ -0.08
CCDC40-210ENST00000573903 FERMT2Q96AC1 680 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 MTMR10Q9NXD2 777 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 NYAP2Q9P242 653 aa14.55□□□□□ -0.08
CCDC40-210ENST00000573903 F5H6K3 240 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 DLL1O00548 723 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 ERC2O15083 957 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 ZBED4O75132 1171 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 KLRC3Q07444 240 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 SNX17Q15036 470 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 ZNF792Q3KQV3 632 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 PRPF38AQ8NAV1 312 aaKnown RBP14.54□□□□□ -0.08
CCDC40-210ENST00000573903 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 NACAP1Q9BZK3 213 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 DCTPP1Q9H773 170 aa14.54□□□□□ -0.08
CCDC40-210ENST00000573903 NDUFB10O96000 172 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 SLC3A2P08195 630 aaKnown RBP14.53□□□□□ -0.08
CCDC40-210ENST00000573903 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 ZNF697Q5TEC3 545 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 C1orf53Q5VUE5 145 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 TSHZ3Q63HK5 1081 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 MSL3Q8N5Y2 521 aaKnown RBP14.53□□□□□ -0.08
CCDC40-210ENST00000573903 REPS2Q8NFH8 660 aa14.53□□□□□ -0.08
CCDC40-210ENST00000573903 NUP88Q99567 741 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-210ENST00000573903 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC40-210ENST00000573903 CLIP2Q9UDT6 1046 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms