RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PTPAQ15257 358 aa23.64■■□□□ 1.38
CHRNE-202ENST00000572438 SHROOM1Q2M3G4 852 aaPredicted RBP23.64■■□□□ 1.38
CHRNE-202ENST00000572438 CCAR1Q8IX12 1150 aaKnown RBP23.64■■□□□ 1.38
CHRNE-202ENST00000572438 DACT1Q9NYF0 836 aa23.64■■□□□ 1.38
CHRNE-202ENST00000572438 A0A1W2PQ27 194 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 A0A1W2PQ64 194 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 A0A1W2PQD8 194 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 GDF11O95390 407 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 EEF2P13639 858 aaKnown RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 CALML3P27482 149 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 TOB1P50616 345 aaPredicted RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 SEPT2Q15019 361 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 RBM26Q5T8P6 1007 aaKnown RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 FAM177A1Q8N128 213 aaPredicted RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 GPKOWQ92917 476 aaPredicted RBP eCLIP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 RRP36Q96EU6 259 aaKnown RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 CPVLQ9H3G5 476 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 DDX19AQ9NUU7 478 aaKnown RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 GJA3Q9Y6H8 435 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 FRMPD2Q68DX3 1309 aaPredicted RBP23.63■■□□□ 1.37
CHRNE-202ENST00000572438 ZNF543Q08ER8 600 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 WWC2Q6AWC2 1192 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 TNFRSF25Q93038 417 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 TMEM39BQ9GZU3 492 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 RIOX1Q9H6W3 641 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 GRPEL1Q9HAV7 217 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 CABP5Q9NP86 173 aa23.63■■□□□ 1.37
CHRNE-202ENST00000572438 PPP6R2O75170 966 aa23.62■■□□□ 1.37
CHRNE-202ENST00000572438 ICA1Q05084 483 aa23.62■■□□□ 1.37
CHRNE-202ENST00000572438 MICALL2Q8IY33 904 aa23.62■■□□□ 1.37
CHRNE-202ENST00000572438 JMYQ8N9B5 988 aa23.62■■□□□ 1.37
CHRNE-202ENST00000572438 BARHL2Q9NY43 387 aa23.62■■□□□ 1.37
CHRNE-202ENST00000572438 BAZ2BQ9UIF8 2168 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 NR1I2O75469 434 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 HEATR3Q7Z4Q2 680 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 CCDC148Q8NFR7 591 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 UBA5Q9GZZ9 404 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 NUP62CLQ9H1M0 184 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 SEC63Q9UGP8 760 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 ZNF541Q9H0D2 1346 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 STXBP3O00186 592 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 TBC1D12O60347 775 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 GH2P01242 217 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 TNNI2P48788 182 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 RRP1BQ14684 758 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 GPATCH4Q5T3I0 446 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 CCDC73Q6ZRK6 1079 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 SIAH1Q8IUQ4 282 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 FSIP1Q8NA03 581 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 MRPS27Q92552 414 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 GOLPH3LQ9H4A5 285 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 PGAP2Q9UHJ9 254 aa23.61■■□□□ 1.37
CHRNE-202ENST00000572438 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
CHRNE-202ENST00000572438 EGFRP00533 1210 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 JAG1P78504 1218 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 AXDND1Q5T1B0 1012 aaPredicted RBP23.6■■□□□ 1.37
CHRNE-202ENST00000572438 TYW1BQ6NUM6 668 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 CLSTN2Q9H4D0 955 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 GPCPD1Q9NPB8 672 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 PCDHA4Q9UN74 947 aa23.6■■□□□ 1.37
CHRNE-202ENST00000572438 MARCKSP29966 332 aaPredicted RBP23.59■■□□□ 1.37
CHRNE-202ENST00000572438 EARS2Q5JPH6 523 aaKnown RBP23.59■■□□□ 1.37
CHRNE-202ENST00000572438 GALNT17Q6IS24 598 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 HOMER1Q86YM7 354 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 PIGSQ96S52 555 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 VAT1LQ9HCJ6 419 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 FAM205CA6NFA0 338 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 XRCC6P12956 609 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHRNE-202ENST00000572438 LMNB1P20700 586 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 FAM160A1Q05DH4 1040 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 CCDC96Q2M329 555 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 CDAN1Q8IWY9 1227 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 BLIDQ8IZY5 108 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 DAGLBQ8NCG7 672 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 CCDC12Q8WUD4 166 aaPredicted RBP23.59■■□□□ 1.37
CHRNE-202ENST00000572438 DCAF4Q8WV16 495 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 NOL7Q9UMY1 257 aaKnown RBP23.59■■□□□ 1.37
CHRNE-202ENST00000572438 CEP131Q9UPN4 1083 aa23.59■■□□□ 1.37
CHRNE-202ENST00000572438 ENGASEQ8NFI3 743 aa23.58■■□□□ 1.37
CHRNE-202ENST00000572438 SYT17Q9BSW7 474 aa23.58■■□□□ 1.37
CHRNE-202ENST00000572438 TSPY26PQ9H489 355 aa23.58■■□□□ 1.37
CHRNE-202ENST00000572438 PCDHB6Q9Y5E3 794 aa23.58■■□□□ 1.37
CHRNE-202ENST00000572438 hCG_1984214I3L0E3 225 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 SNW1Q13573 536 aaKnown RBP23.57■■□□□ 1.36
CHRNE-202ENST00000572438 SLFN13Q68D06 897 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 SAMD7Q7Z3H4 446 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 ZNF713Q8N859 430 aaPredicted RBP23.57■■□□□ 1.36
CHRNE-202ENST00000572438 GMCL1P1Q8NEA9 526 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 TNMDQ9H2S6 317 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 SYNPO2Q9UMS6 1093 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 MYH4Q9Y623 1939 aa23.57■■□□□ 1.36
CHRNE-202ENST00000572438 TRIM75PA6NK02 468 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 CMA1P23946 247 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 MAP3K10Q02779 954 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 RASA3Q14644 834 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 MAP3K11Q16584 847 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 TBC1D10BQ4KMP7 808 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms