RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 CAMK2GQ13555 558 aaPredicted RBP5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 FAM50AQ14320 339 aaKnown RBP5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 TMC4Q7Z404 712 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 SLFN12Q8IYM2 578 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 SHISA4Q96DD7 197 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 CCDC120Q96HB5 630 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 SIN3AQ96ST3 1273 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 PCDHA11Q9Y5I1 949 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 FANCD2Q9BXW9 1451 aa5.55□□□□□ -1.52
TOM1L1-212ENST00000572360 TOPBP1Q92547 1522 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 UGGT2Q9NYU1 1516 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 RBM47A0AV96 593 aaKnown RBP5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 LMNB1P20700 586 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 GLDCP23378 1020 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 ITGAEP38570 1179 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 LMNB2Q03252 620 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 EGR3Q06889 387 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 ATG14Q6ZNE5 492 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 SND1Q7KZF4 910 aaKnown RBP eCLIP5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 BAHD1Q8TBE0 780 aaPredicted RBP5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 GATAD2BQ8WXI9 593 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 G6PC3Q9BUM1 346 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 EPB41L4BQ9H329 900 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 DUSP13Q9UII6 198 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 MIA2Q96PC5 1412 aa5.54□□□□□ -1.52
TOM1L1-212ENST00000572360 POLA1P09884 1462 aaPredicted RBP5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 ABCA5Q8WWZ7 1642 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 MYOCOSA0A1B0GUC4 107 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 RLBP1P12271 317 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 TEKQ02763 1124 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 KCNA10Q16322 511 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 TTLL10Q6ZVT0 673 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 PDZD8Q8NEN9 1154 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 FBXO27Q8NI29 283 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 RNF141Q8WVD5 230 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 KREMEN1Q96MU8 473 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 SMG5Q9UPR3 1016 aaKnown RBP5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 FHOD3Q2V2M9 1422 aa5.53□□□□□ -1.52
TOM1L1-212ENST00000572360 PTPRKQ15262 1439 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 CNTLNQ9NXG0 1405 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 NFIBO00712 420 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 GRIN3BO60391 1043 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 RAC2P15153 192 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 PSMD2Q13200 908 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 NR0B2Q15466 257 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 LINC01599Q8WXQ3 324 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 MCOLN1Q9GZU1 580 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 TRIT1Q9H3H1 467 aaKnown RBP5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 GPATCH2Q9NW75 528 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 CDK11AQ9UQ88 783 aaPredicted RBP5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 ROCK1Q13464 1354 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 MTUS2Q5JR59 1369 aa5.52□□□□□ -1.53
TOM1L1-212ENST00000572360 LAMC3Q9Y6N6 1575 aa5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 HTR3BO95264 441 aa5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 YARSP54577 528 aaKnown RBP5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 ZSCAN18Q8TBC5 510 aaPredicted RBP5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 TMEM74Q96NL1 305 aa5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 GCM1Q9NP62 436 aa5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 POLR1AO95602 1720 aaPredicted RBP5.51□□□□□ -1.53
TOM1L1-212ENST00000572360 NCOA1Q15788 1441 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 TMEM253P0C7T8 217 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 GALK1P51570 392 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 LINC00310P59036 64 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 FAM160A1Q05DH4 1040 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 LILRA6Q6PI73 481 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 RSRP1Q9BUV0 290 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 YBX2Q9Y2T7 364 aaKnown RBP5.5□□□□□ -1.53
TOM1L1-212ENST00000572360 ARID4BQ4LE39 1312 aaPredicted RBP5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 LRRIQ1Q96JM4 1722 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 PSPNO60542 156 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 UBOX5O94941 541 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 KCNN1Q92952 543 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 CRELD1Q96HD1 420 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 SLC26A8Q96RN1 970 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 KIF2CQ99661 725 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 BCL11AQ9H165 835 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 ZNF552Q9H707 407 aaPredicted RBP5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 KCNQ5Q9NR82 932 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 KCNH3Q9ULD8 1083 aa5.49□□□□□ -1.53
TOM1L1-212ENST00000572360 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 ZBED9Q6R2W3 1325 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 DENND4BO75064 1496 aaPredicted RBP5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 RPRD2Q5VT52 1461 aaKnown RBP5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 RAD54L2Q9Y4B4 1467 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 CCDC7Q96M83 1385 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 FITM1A5D6W6 292 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 LTKP29376 864 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 FAM196AQ6ZSG2 479 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 ERMP1Q7Z2K6 904 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 IRF2BP1Q8IU81 584 aa5.48□□□□□ -1.53
TOM1L1-212ENST00000572360 LILRA2Q8N149 483 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms