RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
SCAMP2-212ENST00000569904 PLIN4Q96Q06 1357 aa14.84□□□□□ -0.03
SCAMP2-212ENST00000569904 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 COBLO75128 1261 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 LRRFIP1Q32MZ4 808 aaKnown RBP14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 DPP9Q86TI2 863 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 C7orf61Q8IZ16 206 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 REPS2Q8NFH8 660 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 STAP2Q9UGK3 403 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 ZNF214Q9UL59 606 aaPredicted RBP14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 PPP1R9AQ9ULJ8 1098 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 SYNPO2Q9UMS6 1093 aa14.83□□□□□ -0.04
SCAMP2-212ENST00000569904 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 M0R2C6 588 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 VWA5AO00534 786 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 ERC2O15083 957 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 CYP2C19P33261 490 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 RIOX2Q8IUF8 465 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 MKL1Q969V6 931 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 SLC5A4Q9NY91 659 aa14.82□□□□□ -0.04
SCAMP2-212ENST00000569904 DNM1LO00429 736 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 COPB2P35606 906 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 MAML3Q96JK9 1138 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 ZNF287Q9HBT7 754 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 FBXO28Q9NVF7 368 aa14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 DIS3Q9Y2L1 958 aaKnown RBP14.81□□□□□ -0.04
SCAMP2-212ENST00000569904 SMCHD1A6NHR9 2005 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 ATP2A1O14983 1001 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 SEPT4O43236 478 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 FCER1AP12319 257 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 LRRC26Q2I0M4 334 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 FAM83BQ5T0W9 1011 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 IFNL3Q8IZI9 196 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 NRBP1Q9UHY1 535 aa14.8□□□□□ -0.04
SCAMP2-212ENST00000569904 COL6A3P12111 3177 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 MINDY4BA8MYZ0 360 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 F5H6K3 240 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 NDUFB10O96000 172 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 MX1P20591 662 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 STAT3P40763 770 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 TDO2P48775 406 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 KLRC3Q07444 240 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 PLS1Q14651 629 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 ZMYM1Q5SVZ6 1142 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 GPR153Q6NV75 609 aa14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 OTUD7AQ8TE49 926 aaPredicted RBP14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 ZMYND8Q9ULU4 1186 aaPredicted RBP14.79□□□□□ -0.04
SCAMP2-212ENST00000569904 CNGA1P29973 690 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 MAGEA10P43363 369 aaPredicted RBP14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 HDAC1Q13547 482 aaPredicted RBP14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 ZNF792Q3KQV3 632 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 LRIT3Q3SXY7 679 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 PRPF38AQ8NAV1 312 aaKnown RBP14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 GMCL1P1Q8NEA9 526 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 CEP95Q96GE4 821 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 SEC62Q99442 399 aaKnown RBP14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 MMP19Q99542 508 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 NACAP1Q9BZK3 213 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
SCAMP2-212ENST00000569904 LAMA2P24043 3122 aaKnown RBP14.77□□□□□ -0.04
SCAMP2-212ENST00000569904 SOX1O00570 391 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 FOXP2O15409 715 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 SYN1P17600 705 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 SNX17Q15036 470 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 ARRDC4Q8NCT1 418 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 NEDD1Q8NHV4 660 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 FSD1Q9BTV5 496 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 TEX13BQ9BXU2 312 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 SENP6Q9GZR1 1112 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
SCAMP2-212ENST00000569904 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 TTLL1O95922 423 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 APPP05067 770 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 PDE4BQ07343 736 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 KCTD2Q14681 263 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 C1orf53Q5VUE5 145 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 NUP88Q99567 741 aaPredicted RBP14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 TINF2Q9BSI4 451 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 SLC38A10Q9HBR0 1119 aa14.76□□□□□ -0.05
SCAMP2-212ENST00000569904 PRDM1O75626 825 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 NOVP48745 357 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 OAZ1P54368 228 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 PPARAQ07869 468 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 AAMPQ13685 434 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 STK11IPQ8N1F8 1099 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 NAPBQ9H115 298 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 ANAPC4Q9UJX5 808 aa14.75□□□□□ -0.05
SCAMP2-212ENST00000569904 FEM1BQ9UK73 627 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms